KEGG   Vitis riparia (riverbank grape): 117911338
Entry
117911338         CDS       T07274                                 
Name
(RefSeq) squalene synthase 1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri00100  Steroid biosynthesis
vri00909  Sesquiterpenoid and triterpenoid biosynthesis
vri01100  Metabolic pathways
vri01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:vri00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    117911338
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    117911338
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:vri01006]
    117911338
Enzymes [BR:vri01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     117911338
Prenyltransferases [BR:vri01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   117911338
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 117911338
NCBI-ProteinID: XP_034681563
LinkDB
Position
3:313861..327826
AA seq 413 aa
MGSLGAILTHPDDIYPLLKLKMAVRHAEKQIPPEPHWAFCYTLLHKVSRSFGLVIQQLGT
ELRNAICIFYLVLRALDTVEDDTSIPTDVKVPILIAFHRHIYDRDWHFACGTKDYKVLMD
QFHHVSTAFLELERGYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASKLEDLASDELSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKEEENSIKAVQCLNDMVTNALIHMEDCLKYMSALQSPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMSDVYGAFFDFSCMLKSKVDKNDPNATKALSRL
EAVQKICRESGALTKRKSYVIRSEPRYNSALIVAFFIILSIIFAYLSANRQNN
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgggcagtttgggagccattttgacgcatccggatgacatatacccgctgctgaagctg
aaaatggcggtacgccacgccgagaagcagatcccgccggagccgcactgggccttctgc
tacactctgctccacaaggtctctcgcagcttcggtctcgtcattcaacagctcggcacc
gagctccgcaacgccatatgcattttctatttggttcttcgagcactcgacactgttgag
gatgatacaagcattcctacagatgtcaaagtgcctattctgatagcttttcatcgtcat
atatatgaccgtgactggcattttgcatgtggtacaaaggactacaaggttctcatggac
caattccatcatgtttcaactgcttttctggagcttgaaagaggttatcaggaggcaatt
gaagacatcaccaaacgaatgggggcaggaatggcaaaatttatttgcaaggaggtggaa
accattgatgactatgatgaatattgccactatgtagcaggacttgttggattaggattg
tccaagcttttccatgcctccaagttggaagatttggcttctgatgaactctccaactca
atgggtttatttcttcagaaaacaaatataatccgagattatctggaggatataaatgag
atcccaaagtcacgcatgttttggccccgtgagatttggagtaaatatgttaacaaactt
gaggacttgaaagaggaggaaaactcaatcaaagcagtgcaatgcttgaatgacatggtc
actaatgctttaatacatatggaagattgcctgaaatacatgtctgctttgcagagtcca
gcaatatttcgattttgtgctatcccacagatcatggcaatcgggacactagctttatgc
tacaacaatattgaggtcttcagaggagtagtaaaaatgaggcgtggtcttactgccaaa
gttattgacagaacaaaaacgatgtctgatgtctatggtgctttcttcgatttttcttgt
atgctgaagtccaaggttgacaagaatgacccgaatgctacaaaagcattgagcaggcta
gaagcagtacagaaaatttgcagggaatctggagcccttaccaaaaggaaatcctatgta
atcaggagcgaaccaagatataattcggctctgattgtggcattcttcatcatactgtcc
atcattttcgcgtatctatctgccaaccgtcagaataattaa

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