Vitis riparia (riverbank grape): 117911436
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Entry
117911436 CDS
T07274
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117911436
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117911436
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
117911436
NCBI-ProteinID:
XP_034681700
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All DBs
Position
3:complement(4860754..4866488)
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AA seq
823 aa
AA seq
DB search
MLIGRAQELSSSTLTITTAFSSSPNPNYTFSLPMRTPVLSSLSLLRSLSPSLHHRFLCSL
SLSNYSKSFFFPLPTTNIRHSSLFRRPPLAKPLSSFVEQVVGESERDENEGFSRGGEGES
FDFGVAFGSTDLRHLSSPSLEVKELEELPEQWRRSKLAWLCKELPAHKPATLIRILNAQK
KWVRQEDATYIAVHCMRIRENETGFRVYKWMMQQHWFQFDFALATKLADYMGKERKFSKC
REIFDDIIKQGLVPCESTFHILIIAYLSASVQGCLDEACGIYNRMIQLGGYQPRLSLHNS
LFRALVGQPGGSSKYFLKQAEFIFHNLVTSGFEIHKDVYGGLIWLHSYQDTIDRERIASL
REEMQLAGIEESRDVLLSILRACSKEGDVEEAEKTWLKLLHSDCAIPSQGFVYRMEVYAK
VGEPMKSLEIFREMQEQLGSTSVVAYHKIIEVLSKAQEIELVESLMTEFINSGMKPLMPS
YIDLMNMYFNLSLHDKLEAAFYECLEKCRPNRTIYNIYMDSLVQIGNLDKAEEIFNQMYS
NGAIGVNTKSCNTILSGYLSRGDYLKAEKIYDLMCQKKYAIDAPLMEKLDYVLSLSRKVV
KRPVSLKLSKEQREILIGLLLGGLQMESDEERKNHVIYFEFNENSGAHSVLRRHIHEQYH
EWLNSSSKLSDDNDDVPYKFSTISHSYFGFYADQFWPRGRPMIPKLIHRWLSPRVLAYWY
MYGGHRTSSGDILLKLKGSREGVEKVVRTLKAQSMDCRVKRKGTVFWIGLLGSNSTWFWK
LIEPYILDDVKDFVKAGCQNTISFGSGSDTDENAADYSDNENS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcggcagagcacaagagctctcatcttccactctcaccataaccaccgctttc
tcctcgagccctaaccctaactatactttttcccttcccatgcgcacacccgtcctttct
tcactctctcttctccgctccctctccccctctctccaccaccgcttcctgtgctccctc
tccctctccaactactcgaaatcctttttcttcccattacccactactaatatccgtcat
tcatctctatttcggcggcccccattggcgaagccgctgagtagttttgtcgaacaggtg
gtaggtgaatcggagagggacgagaatgagggtttttctcgcggaggggagggcgagagt
ttcgacttcggggttgcttttggttccactgatttgaggcacttgagttcgccttcttta
gaggttaaggagctggaggagctgccggagcagtggagaaggtcgaagttggcttggctg
tgcaaggaactgccggcgcacaagcctgcgactttgattcggatactgaatgcacagaag
aagtgggttaggcaggaggatgcgacttatattgcggtgcattgtatgcggattcgtgag
aatgaaactggatttagagtgtacaaatggatgatgcaacaacattggtttcaatttgat
tttgctcttgctactaagctagcagattatatggggaaggagcggaagttttcaaaatgt
cgggagatatttgatgacataattaagcagggacttgtgccttgtgaatctacatttcat
attctaatcattgcctatcttagtgcatcagtacaaggctgcctggatgaagcatgtggc
atttacaatcgtatgattcagttgggaggttaccagccccggcttagcttgcacaattct
ctcttccgggctcttgttggccaaccaggaggctcttcaaaatactttctcaaacaggcg
gagttcattttccataacttggtgacatctggattcgagatacacaaagatgtttatggt
ggcctaatttggctacatagctatcaggataccatagatagagaaaggatagcatcacta
agggaagagatgcaattagcaggaattgaagaaagcagagatgtgcttttgtccatcttg
agagcttgctcgaaggaaggagacgtggaagaagctgaaaaaacttggctcaaactcctc
cattctgattgtgctattccttctcaaggttttgtgtacagaatggaagtctatgcaaag
gtaggggagcctatgaaatctttggagatattcagggagatgcaagagcagttgggctcc
accagtgttgtggcatatcataaaatcatagaggtgttatctaaagctcaagaaattgaa
cttgtagagtctcttatgacagagttcataaacagtgggatgaaacccctcatgccatct
tatattgatctaatgaatatgtatttcaatttaagcttgcatgataaattggaggcagcc
ttctatgagtgcctggagaaatgtcgtccaaatagaactatttacaatatttacatggat
tctttggtacaaattggcaaccttgataaggctgaggagatcttcaaccaaatgtatagt
aatggggcaattggtgtcaatactaaatcatgcaacactattttaagtggatatctctct
cgtggagattacttgaaagctgaaaagatatatgatttgatgtgccagaagaaatatgct
attgatgctccattgatggaaaagcttgattatgttctaagcttgagcaggaaagttgtt
aagagacctgtgagcctgaagctaagcaaagaacaacgggagattttgattggtttgctg
ttaggtggtttgcagatggaatcggatgaagagaggaagaatcatgtgatttattttgag
ttcaacgagaactctggtgcacattctgttttgaggagacatatacatgagcagtaccat
gagtggttaaattcttccagtaagctaagtgatgacaatgatgatgtaccatacaagttt
tctaccatctcacattcttattttggtttctatgcggaccagttctggcctagaggtcga
cccatgattccaaagttaatccatcggtggttgtcaccacgtgttcttgcttactggtat
atgtatggaggccacagaacatcatctggggacattttgttaaagctaaagggaagtcgt
gagggtgttgagaaggtcgtcagaacattgaaagcacaatcaatggattgccgggtcaag
aggaaaggaactgtgttttggataggattgctgggaagcaattctacctggttctggaaa
ctgattgaaccatatattctggatgacgtgaaagattttgtcaaagctggctgccaaaat
accattagctttggcagtgggtctgataccgatgaaaatgctgccgattacagtgacaat
gagaattcatag
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