Vitis riparia (riverbank grape): 117911487
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Entry
117911487 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117911487 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117911487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117911487
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117911487
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
117911487
NCBI-ProteinID:
XP_034681777
LinkDB
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Position
3:1123233..1159471
Genome browser
AA seq
1983 aa
AA seq
DB search
MAASASASAVDLAPNPSSVDGLLWWDSFSLLLTELESVSPSSDLPPFLVKKVKDNHAWFV
DMFSLFKPPNKKSREALDSKQVKFGTRQLTVQPELKEAALKVSNSLCLDEVQSYLLVERF
VEQNNVAVNLMVQEFLHVILFQYYIERQCLLKCTRQIFMHALYVGSGSEEGNAIRQEAQS
LISDGLESKLLSVLYDLLSSSHPEHMDIDLFTLWAEETLIEDNLILDILFLAYYESFCVC
NGAQWKKLCLLYKGIISGSFNFGKLAISPEATHSFYHAKVQLLLILIETLDLENLLQLIH
DEMPFREGCTLFSLTDVQEIDAIISGFNAFETKEAGPLILTWAVFLCLISSLPGKQENSV
LMDIDHVGYVRQAFEAASLSYFLELLQSDILKDSDGPVAGYRSVLRTFVSAFIASYEINV
QLEDNTLKLILDILCKIYRGEESLCNQFWDRESFVDGPIRCLLCNLEGEFPIRTVELVGF
LSALCEGTWPAECVYNFLDKSVGISSLLEITSDSLVDNISQIIETRVPLHVPGVEGLIIP
SQTRGHVLKVIDGNTALVRWEYTQSGVLVLLLRLAQRLYLDCNEEVLVTLDLLCRLVSFN
TAVSFALMDIGNSLHVQATRMNAHMEMQVNMVEIICTLIRNLSPNWSSSSMMAMGVSILE
KMLKCSPSHVTAVALKANIFDLASKTSTFETLFTGSTSGSWLLSGKLAKMLLIDCEQNDN
CCQLTISVLDFTKQLVETGEENDFALALVVFSLQYVLVNHEYWKYKVKHVRWKVTLKVLE
VMKKCIMTIPYSQKVGEIVQDILLRDSSIHNALFRIICTTKQALEKLYMSRLCEAMEIEG
LELAICSVFDILFTMLSKLSKDITSSLPVFDHAVLSTTTKPISVIAAVISLISYFHNPRI
QVGASRVLSMLFIIADSSQPYLFGNRCFGLDDKQITDLRHSIDKILSDQSSYNEDLFVAT
VKLLTSAALHQPAFLVAIIAAKDNLGLKQPVNEASFGTLGSVKASLVDALLQVIERSDDL
INSNPRLLLNVLNLLKALWQGAAQYADILEWLKNSEKFWKLFCNSISLIARTKAPLPENL
TEMEALSLAYKYQCQTAVLEIMAEDLFLQKKLLHAEFLVKLAAESSKEKTGTTVGLEKSR
SENLHHLKDVLSSWCENSVLVDLIKSYASCQYDTEIYLRAKIAASLFIVHVMGKLATGDA
GSLSVSLLEKLHSMNKKLGNQPAFSELLSQYSQRGYSEGKELNILILSDLYYHLQGELKG
RKIDPGPFKELAQYLLDSQFLQNYRHEYDGDLFAPAKDVHLFDTSHLQADLGLAMWDHSQ
WKATKEIAEIMLLCMKEANSMVLLTGSKLCSLKALITILTMYEEDLSERKTTIGGAIPEQ
LILSCIDHVCQCFHDTLESLAPVLDAPEDMLDFLAAQAELLLRLIRFVNKSLPLPVCVLV
LKTSGHGLKVLGNFKPSVPGVRTTMKLLLMLLLSSLEFSSLSSLLGGLSDKKSVEDLAEA
SSVSLGLLPILCNCIGTAENCVLSLTTIDLILKGFLTPNTWFPIIQEHLQLQHIVLKLQD
KSSLASIPIILRFLLTLARVRGGAEMLLTAGFFSSLRVLFADLSAGRPFSVIQNGTSRSN
SSENFEKPQHVWGLGLAVVTAIIHSLGGSSSCVNTVENVIPYFFSEKAYLISYYLNAPDF
PSDDHDKKRARAQRTKTSLAALKETEHTLMLMCVLAKHWNSWVKAVKEMDTELRERSIHL
LAFISRGTQRHGESPSRIPPLLCPPMLKEDFDFYKKPAFVNSKNGWFALSPRGCLSKSKF
SSVSIKSTALVVKDQSSENLDVSQTHFSDIVALQIYRITFLLLKFLCLQAEGAARRAEEV
GFVDLAHFPELPMPEILHGLQDQAIAIVTELCEANKLKKIEPEVQSTCLLLLQIMEMALY
LEQCVSQICGIRPVLGRVEDFSKEVVLLIRATEGHSFLKAAVKSLKQIISLVYPGLLQTE
GLL
NT seq
5952 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgcctccgcctccgccgtcgatctagcgccaaaccctagctccgtcgat
ggcttgctctggtgggactccttcagtctcttactcaccgagctcgagagcgtttcccct
tcctcggacctccctccatttctggtgaagaaggtgaaggataatcatgcgtggtttgtg
gacatgttttctttgtttaagcctcccaacaagaagtcgagggaggctttggattctaag
caagtgaaatttggaactcgtcaattgactgtacagcctgagttgaaggaggctgctttg
aaagtcagcaattcgttgtgtttagatgaggtgcagtcataccttcttgtcgaaaggttt
gttgagcaaaacaatgtagctgttaatttaatggttcaagaatttcttcatgtgatattg
tttcaatactacattgaacgacagtgcttgctgaagtgtaccagacagattttcatgcat
gctctatatgttggaagtggctctgaagagggtaatgccattaggcaggaggcacaaagc
ctgatttctgatggattagagagcaaattattatctgtcctctatgaccttctatcatcc
agccatccagagcacatggatattgacctattcactttatgggctgaagagacacttatt
gaagacaatttgatcttggacattcttttccttgcctattatgagtcattttgtgtttgt
aatggtgcacagtggaaaaaattgtgcttgctttacaagggaatcatttctgggtctttt
aactttggaaagctggcaatttcacctgaagcaacacattctttttatcacgctaaagtt
cagctgctactcatccttatagaaaccctggacctggaaaatcttcttcaattgattcat
gatgaaatgcctttcagggagggttgcactttgttttccttgactgatgtccaagaaata
gatgcaataatatcaggtttcaatgcttttgaaacaaaggaagcaggcccactaattctt
acatgggctgtgtttctctgccttatttcatcacttcctggaaaacaggaaaatagtgtg
ctaatggatattgatcatgtcggttatgttcgtcaagcctttgaggctgcatcattgagt
tattttcttgaacttcttcaaagtgacatattgaaggattcagatggacctgttgctggt
tataggagtgtcttgagaacttttgtctctgcatttattgcatcttatgagataaatgtt
cagctagaggacaatacacttaaattgatactggatattctttgcaaaatttatcgagga
gaggaatctctctgcaatcagttctgggatagggagagttttgttgatggtcctattcgg
tgtcttctttgcaacttggaaggtgaattcccgatcaggactgtggaacttgttggcttt
ttatcagctctttgtgaaggaacttggccagcagaatgcgtgtataatttccttgataaa
tctgttggcatatcatccttgttagagattactagtgattccttggtggataacatttct
cagattattgaaacacgggtgccactgcatgttcctggggttgaaggattaattattcct
agtcaaacacgtggtcatgttttgaaagtgattgatggcaatactgctctagtacggtgg
gagtacacacaatctggggtgttggtgttgcttctgcgtttagcccagaggttgtattta
gattgcaatgaagaagtccttgttaccctggatctgctctgtcgactggtatcctttaac
acggctgtttcttttgctttgatggacattggaaactccctgcatgttcaagcaactcgc
atgaatgcacacatggaaatgcaggttaatatggtggagatcatttgcactttgataaga
aatttatcccctaattggagcagttcttcaatgatggccatgggtgtcagcattttagaa
aaaatgttaaaatgttctccatctcatgttacagccgtggctctgaaggcaaacatattt
gatttggcttctaagacaagtacatttgaaactctctttactggttcaacaagtggatca
tggttgctttctgggaaacttgcaaagatgctcttaattgactgtgagcaaaatgacaac
tgctgccagttgacaatttcggtgctggattttaccaaacagcttgtggaaactggagaa
gaaaatgattttgccctggctcttgttgttttctccctccagtatgttttagtcaatcat
gaatactggaaatacaaggtgaagcatgttcgctggaaagtaacattgaaggtgcttgaa
gtgatgaaaaaatgcatcatgacaatcccatactctcagaaagtgggtgagattgtccag
gatattttactccgtgattcttctatccacaatgcactctttcgaattatttgtacaact
aaacaggccttggagaaactctacatgagccgtctttgtgaagcaatggagattgaagga
ttagaacttgcaatatgttctgtttttgacattcttttcactatgctatccaagctttca
aaggatattacatcaagcctgcctgtttttgaccatgcagtgctgtcaactacaaccaaa
cccatttctgttattgcagctgtgatatccttgatatcatacttccacaatcctagaata
caagtgggtgctagtagagtactatctatgttattcattatagcagattcttcacaacca
tatttatttgggaatagatgcttcggtttggatgataaacagattacagatttaaggcat
tctattgataagattctaagtgaccagtcttcttataatgaagatctctttgttgctaca
gtcaaattgcttacttctgctgcacttcatcagcctgcttttcttgttgccataattgct
gccaaagacaatctaggtttgaagcagccagtaaatgaagcttcctttggaacactgggg
tctgtcaaagcaagtttggtagatgcactcttgcaagttattgaaagatctgatgatctt
atcaatagcaatccccgtttactactgaatgtgcttaacttactgaaagcattgtggcaa
ggggctgctcaatatgcagatattttggaatggctgaaaaactctgaaaagttctggaaa
ctattttgcaactccatttctctaattgctagaacgaaagctcccctgcctgaaaatctt
actgaaatggaggctctaagcttggcatacaaataccagtgtcaaacagctgtattggaa
ataatggcagaagacttgttcctgcagaagaagttactgcatgctgaatttcttgtaaaa
cttgctgctgaatcatcaaaggaaaagacaggaactacagttggtttggaaaaatcaaga
tctgaaaatttacaccatcttaaggatgttttgtcatcctggtgtgagaattcagtgttg
gttgacctgatcaagtcatatgcatcttgtcaatatgacactgaaatatatctccgtgca
aagattgctgccagtttattcattgtgcacgtgatgggaaaattagcaacaggtgatgca
gggagtttgtctgtctcattacttgaaaagctacatagtatgaataaaaagctgggcaat
cagcctgctttctctgaattgttatctcaatattcccagcggggttacagtgaagggaag
gaactgaatattttaatactcagtgatctttattatcatcttcaaggagagcttaaaggc
cgtaaaattgatcctgggccattcaaagagcttgcccagtatctactggattcacaattt
ttgcaaaattatcgacatgagtatgatggtgacctttttgcacctgctaaagatgttcac
ttgtttgacaccagtcatttacaagcagatttaggattagctatgtgggatcattcacag
tggaaagcaactaaagaaattgcagaaataatgttgctttgcatgaaggaagctaactca
atggtgttgctcactggatcaaagctttgttcattgaaagcattgataaccatcttgacc
atgtatgaagaagatttaagtgagagaaagactacaataggtggggcgatccctgagcaa
ctcattctatcgtgcatagatcatgtgtgccaatgtttccatgacacactagaatcatta
gctccagttctcgatgctcctgaagatatgcttgatttccttgcagcccaagctgaacta
cttctccgtctcattagatttgtaaacaaaagtctgcctttacctgtttgtgtacttgtt
ttaaaaacctcaggtcatggccttaaagtgttgggtaactttaagccatctgttcctggg
gttagaacaacaatgaagctcttactcatgttgcttctctcatcacttgagttcagctct
ctcagttcacttttaggtgggttgtcagataagaaatctgttgaagacttagctgaagca
tctagtgtgagtttggggctattacctattctctgcaactgcatcggaactgctgagaat
tgtgtcctctccctgacaactattgacttaatactgaaaggcttcttgacacctaacact
tggttccccatcatacaagaacatctccagttgcagcatattgttctgaaacttcaagat
aaaagctctcttgcttccattcccattattttgagatttcttttgacccttgcacgagtg
agaggaggtgctgagatgcttcttactgctggctttttctcatctctgagagtgttgttt
gctgacttatctgctggtaggccattttcagttattcaaaatggtacaagtcgctccaac
tcatctgagaattttgaaaagcctcagcacgtttggggtctaggcttggctgtagtcaca
gcaattattcattctttgggaggcagttcctcgtgtgtcaatactgttgagaatgtaatt
ccttacttcttctctgagaaagcttatttgatatcatattatcttaatgcaccagacttc
ccatctgatgatcatgacaagaaaagagctcgggctcaaaggacaaagacatctcttgct
gctcttaaggaaacagagcatactctaatgttaatgtgcgtgctagcaaagcactggaac
tcatgggttaaggctgtgaaagaaatggatacagagctaagggagagaagtattcatctt
ttggccttcattagccggggaactcaacgccatggagaatcacccagcaggattccacct
ctcttgtgtcctcctatgctcaaagaggattttgatttttacaagaaaccagcatttgtt
aacagcaaaaatggatggtttgctctttctcctcgtggttgtttatcaaaatctaagttc
tcatctgtctcaatcaagtcaactgctcttgtagtcaaggatcaatcatctgaaaatttg
gatgtttctcagacacacttctcagatatagtagccttgcagatctatagaattacattt
cttctattgaaatttctctgtttacaagctgagggtgctgctaggagggccgaggaagtg
ggatttgtagatcttgctcattttcctgaacttccaatgcctgagattttgcacggctta
caggatcaagccattgccattgtcactgaactctgtgaggccaacaaattaaagaagatc
gagcctgaagtccagagcacatgcctcttattactgcaaataatggaaatggccttgtac
ttggaacaatgcgtttcacagatctgtggaatcagacctgttttaggacgcgttgaggat
ttttccaaggaagtcgtcctgttaattagagcaacggagggacattcttttttgaaagca
gcagtaaagtccttgaagcagattatatcacttgtgtatcctggactattacaaactgag
ggcctcttgtga
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integrated database retrieval system
