Vitis riparia (riverbank grape): 117911656
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Entry
117911656 CDS
T07274
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03020
RNA polymerase
vri03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117911656
09124 Replication and repair
03420 Nucleotide excision repair
117911656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117911656
03400 DNA repair and recombination proteins [BR:
vri03400
]
117911656
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117911656
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117911656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
117911656
NCBI-ProteinID:
XP_034681951
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All DBs
Position
3:complement(5744319..5750592)
Genome browser
AA seq
318 aa
AA seq
DB search
MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV
TSKDLISSDHTVVPVDFSDSSGYDSADKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYD
DEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIDVLKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagtatcctaccagcgtttcccaaaaatcaagatccgggaagtcaaggacgac
tacgccaagttcgagctccgtgagaccgatgccagcatggccaacgctctccgccgtgtc
atgatcgccgaagttcccaccgttgccattgaccttgtcgaaatcgaggttaactcctct
gttctcaatgacgagttcatcgcccaccgactcggactcattcctctcaccagtgagcga
gccatgtccatgcgattctctcgcgactgtgacgcatgcgacggtgacggccagtgcgag
ttttgttccgtcgagttccatttgcgcgccaaatgcatgaccgacgaaacccttgatgtt
actagcaaggacctcatcagctccgaccatactgttgtccctgttgacttctccgattcc
tctggctacgattccgctgataagaagggaattataattgtgaagctgcggcgagggcaa
gaactgaggctgagagctattgccagaaaggggattgggaaggaccacgcgaaatggtca
ccggcggctactgttacttttatgtacgagcctgagattcatatcaatgaagatttgatg
gaatctttgacgcttgaggagaaaacaagttgggttgagagcagtcccacaaaagttttt
gacattgatgctagttcccaacaggttgttgtggctgatgctgaggcatacacttatgac
gatgaagtgctcaagaaagcagaagctatggggaagccagggcttgtggagatctatgcc
aaagaagacagttttatattcacagttgaatctactggtgcaatcaaagcttctcagttg
gtgctcaatgcaatagatgttcttaaacaaaagcttgatgcagtgcggctatcagaggat
acggtagaagctgatgatcaatttggtgaactcggtgctcatatgcgaggaggatga
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