Vitis riparia (riverbank grape): 117911868
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Entry
117911868 CDS
T07274
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00040
Pentose and glucuronate interconversions
vri01100
Metabolic pathways
Module
vri_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117911868
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
117911868
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117911868
NCBI-ProteinID:
XP_034682184
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Position
3:complement(2737935..2740608)
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AA seq
424 aa
AA seq
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MGTDIIGIKLLYVLSFFFCVNGRGLGLASSGANGVQMLERSPAELKGANTHLFNVRSFGA
QADGHTDDRRAFTAAWKEACASTGKVKLLIPKGTYMIGPITFAGPCNSVSSLTVVMKGYL
KATTDLAEYGFSAGWIEFGWMKGLTLTGGGTFDGQGVEAWPYNKCPINANCKLLPTNLKF
IAMNKTVVRGITSVNSKFFHIALVECNNFKGSQIKISAPENSPNTDGIHIERSSGVYFSR
SLIATGDDCISVGQGNSQVTITSITCGPGHGISVGSLGKYPNEEDVSGLVVKDCTMTGTT
NGIRIKTWANSPDSSEATNMTFENIVMNNVTNPIIIDQAYCPFMSCASKAPSRVKLSDIY
FKNIRGTSLSAVAVTLKCSRGTPCQNIYLQDVHLDLSSGEKRATSSCRNVRVKYSGTQIP
PPCA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgacataattggtatcaaactgctctatgtgctttccttcttcttttgcgtt
aatggcagaggattaggactagcaagttcaggtgcaaatggtgttcaaatgctagaaaga
agccctgcagaactcaagggggccaacactcacctgtttaatgtcaggagctttggtgct
caagcagatggtcacactgatgatagaagagccttcacagcagcatggaaggaggcctgc
gcctcaacaggtaaagtaaaacttctgataccgaaagggacctatatgattggtcccatt
acatttgcaggtccttgcaacagcgtatcatctctaactgttgtgatgaagggttatttg
aaggctacaacagacttggctgaatatggattcagtgcgggttggattgaatttggatgg
atgaagggtctgaccttgaccggtggagggacctttgatggccaaggtgttgaggcctgg
ccatataataagtgccccatcaatgccaactgcaaacttcttcccactaatttgaagttt
attgcaatgaacaagacggttgttcgaggcataacttcagtgaatagcaagttctttcac
atagctctcgtagaatgcaataatttcaaaggtagccaaatcaagatttctgccccagaa
aacagtcccaacactgatggcatccacattgagcgaagctctggcgtttatttttctcga
tcccttattgctactggcgacgactgcatctctgttggacaaggaaattctcaagtcact
atcacaagcatcacttgtggacctggccatggcatcagtgttggaagcttgggaaaatat
cctaatgaagaagatgtaagtgggcttgtggttaaagattgcaccatgacagggactaca
aacggcatcaggatcaagacatgggctaactctccagatagcagtgaagcaaccaacatg
acattcgagaacatcgtcatgaacaatgtgaccaaccccattataattgatcaagcatat
tgcccattcatgtcttgtgcttccaaggcaccatctagagtgaagctgagtgacatatac
ttcaagaacataagagggacctcattatctgcagtggcggtgacattgaagtgtagcaga
gggaccccatgccagaacatttacctccaagatgttcacctagacctctcatcaggggag
aagcgtgccacttcctcttgtagaaacgttagagtcaaatacagtggcacccaaattcct
cccccttgtgcttaa
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