Vitis riparia (riverbank grape): 117912030
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Entry
117912030 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117912030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117912030
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117912030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
AAA
AAA_28
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
117912030
NCBI-ProteinID:
XP_034682343
LinkDB
All DBs
Position
4:4561557..4569156
Genome browser
AA seq
1442 aa
AA seq
DB search
MESSDISRVTSVRITASNILRNSSVEVFSRSSREEDDEEALKWAALEKLPTFLRIQRGIL
TEEKGQAREIDIKSLGLPERKNLIQRLVTIDGHDNEKFLLKLKERIDRVGLDIPTVEVRF
EHLTVDAEAYVGSRALPTIFNFSANILEGFLNYLHILPSRKKPFSILHDVSGIIKPRRMT
LLLGPPSSGKTTLLLALAGRLGSDLKVSGRVTYNGHGMDEFVPQRTSAYTSQYDLHAGEM
TVRETLDFSARCQGVGGLSDMLAELSRREKAANIKPDPDIDIYMKAAALEGQKTSVVTEY
MLKILGLEICADTLVGDVMIRGISGGQKKRLTTGEILVGPARALFMDEISTGLDSSTAFQ
IVNSLRQSIHILNGTAFISLLQPAPETYNLFDDIILLSDGKIVYQGPCENVLEFFGYMGF
KCPERKGVADFLQEVTSRKDQEQYWARKDEPYSYVTVKEFAEAFQSFHIGQKLGDELAVP
FDKTKGHPAALTTKKYGISKRELLRACTSREFLLMKRNSFVYIFKMIQLIIVAFINMTSF
LRTEMSRNTVEDGGIFMGALFFAVLMIMFNGFTELPMTIFQLPVFYKQRDLLFFPSWAYS
LPKWILKMPIAFAEVGAWVIMTYYVIGFDPNIERFFKQYLLLLCIHQMASGLLRLMAAMG
RNIIVANTFGSFALLIVMVLGGFVLSKDDVKPWWEWGYWVSPLMYGQNAISVNEFLGNSW
RHVPANSTESLGVLVLKARGVFTEPHWYWLGVGALIGYVLLFNFLFTLALSYLNPFGKSQ
PILSKETLTEKQANRTEELIELSPETGARIHSGSSRSLSARVGSITEADQSRKRGMVLPF
EPLSISFDEIRYAVDMPREMKAQGITEDRLELLRGVSGSFRPGILTALIGVTGAGKTTLM
DVLAGRKTSGYIEGIIKVSGYPKKQETFARVLGYCEQTDIHSPHVTVYESLLYSAWLRLP
SEVDSATRKMFIEEVMELVELNSLREALVGLPSENGLSTEQRKRLTIAVELVANPSIIFM
DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYAG
PIGRHSSHLIKYFEGINGVSKIKDGYNPSTWMLEVTSAAQEVALGVNFTEEYKNSELYRR
NKALIKELSSPPPGSKDLYFSTQYSQSFFTQCLACLWKQHWSYWRNPAYTAVRLFFATFI
ALMLGTIFWDFGSKRKTQQDLFNAMGCMYVSVIFIGIQNSLSVQAVVAIERTVFYRERAA
GMYSAFPYAFGQVMIELPHIFIQTIIFGLIVYAMVGFEWTVTKFFWYLFFMYFTFLYFTF
YGMMAVAITPNQHISGIVSSAFYGLWNLFSGFIIPHTRIPVWWKWYFWSCPVSWTLYGLL
VTQFGDIKERLESGERVEDFVRSYFGYRNDFVGVVAGIVVGITVLFGFIFAYSIRAFNFQ
KR
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggagagtagtgatattagcagagtaactagtgtacgtattactgcttctaacatactc
aggaacagctctgtggaagttttctcgagatcttctcgggaagaagatgatgaagaagcc
ctgaaatgggctgctctcgagaaactgcctacattccttcgtatacagagaggcatcctc
actgaagaaaagggccaggcaagggaaattgatataaagagccttgggttgccagagagg
aagaatctgatccagcggcttgtgacgattgatgggcatgataatgagaagttcttgttg
aagctcaaggagcggattgatcgagttggacttgatattccaacggttgaagttcgattc
gagcacttaacagttgatgcagaggcttatgttggaagcagagcattacccactatattc
aacttctcagcaaatattttggaggggttcttgaattatcttcacattcttcctagtaga
aagaaacccttctcaatcctccatgatgttagtggaatcatcaagcctcgcagaatgact
ttgcttctaggacctccaagctctgggaagactacactgttattagctttggcaggaaga
cttggttcagatctgaaggtttcgggcagagttacctacaatggccatggaatggatgag
tttgttccacagaggacttcagcttatacaagtcaatatgatcttcatgctggagaaatg
acagtgcgagaaacattagatttttcagctagatgtcagggggttggaggcctttccgat
atgttagcagaattatcaagaagagagaaggctgcaaacatcaagcctgatcctgatatt
gatatctacatgaaggctgcagcactagaagggcagaagaccagtgtagtcacagaatat
atgctcaagattctaggacttgaaatctgcgctgatacattggtgggggatgtaatgata
cgaggcatatcaggcggacaaaaaaagcgactcacaacaggggagatactggttggacca
gccagagcacttttcatggatgagatatcaactggtttggatagttcaacagcttttcag
attgtaaattcactcaggcagtccatccatattcttaatggaactgcttttatctctctc
ctccaaccagcaccagaaacatacaacctctttgatgatataattctcctctctgatgga
aaaattgtgtatcaaggtccctgtgaaaatgtgctcgagttctttggatacatgggcttc
aaatgtccagaaaggaaaggagtggctgacttcttacaagaagtgacatcaaggaaggat
caagagcagtactgggcgcgtaaggacgagccttatagctatgttactgtcaaggaattc
gctgaagcgtttcaatcctttcatattggtcagaaactaggtgatgagcttgctgtgcca
ttcgataagaccaaaggccaccctgccgctttgacaaccaaaaaatatggtattagcaag
agagaactgttgagagcttgcacatccagggaattcttgcttatgaagaggaattcattt
gtctatattttcaaaatgatccaacttattattgtggcttttataaacatgacatcgttt
ctccgaactgagatgtcgcgaaatacagtagaagatggggggattttcatgggtgccctt
ttctttgcagtcttgatgattatgttcaatggattcacagagcttcccatgaccatcttc
caacttccagtcttttacaagcaaagggaccttctcttctttccctcctgggcatactct
ctacctaaatggatcctcaagatgccaattgcatttgctgaagttggtgcctgggtgatc
atgacttattatgtcataggctttgatccaaacatagaaaggttcttcaagcaatatttg
ctactgctatgcattcaccagatggcttcaggacttcttcggttgatggcggcaatggga
aggaacatcatagttgcaaacacatttggctcatttgcattacttatagtcatggttttg
ggtggatttgtcttgtcaaaagatgatgtgaagccatggtgggaatggggttattgggtc
tcacctttgatgtatgggcagaatgcaattagtgtgaatgaattccttgggaacagctgg
agacatgttccggctaactcaacagaatcattaggagttctagtcttgaaagctcgtggg
gttttcacagaaccacactggtattggctgggagtaggagctttgattggatatgtgctc
ctattcaatttcctcttcactttggctctatcatatctaaatccatttgggaagtctcaa
ccaattctatccaaagagaccttaactgagaaacaagctaacagaacagaagagttgatt
gagctgtcaccagaaacgggagcaagaattcatagtggatcatccaggtcattgtctgca
agagtgggctccattactgaagctgaccagagcaggaaaaggggaatggttcttcctttc
gaacctctgtctatctcttttgatgaaatcagatatgcagtggacatgccacgggaaatg
aaagcacaaggcatcactgaggacagattggaacttctgagaggcgtgagcggttcattc
aggccaggaatccttacagccctaataggtgttaccggtgctggaaaaactactctgatg
gatgtattggctggaagaaaaaccagtggatatattgaaggaattatcaaagtgtccggg
tacccaaagaaacaggaaacttttgctcgtgtgttgggatattgtgagcaaactgatatc
cactctcctcacgttacagtctatgagtccttgctttattctgcatggcttcggttacct
tctgaagtcgattcagcaaccaggaagatgttcattgaggaggttatggagcttgtggaa
ctaaactcattgagggaagcacttgttggattgcccagtgaaaatggtctgtcaacagag
cagcgcaagagactgaccattgcagttgagcttgttgccaacccatctataatattcatg
gatgagccaacatctgggcttgatgccagggcagcagcaatagtgatgagaacagtgagg
aacacagtggacacaggaagaactgtggtgtgcaccatccaccagccaagcatagatata
tttgatgcctttgatgagctacttctcttgaaacggggaggcgaagaaatttatgcaggc
ccaataggtcgccattcttcccatctgatcaagtactttgagggaattaatggagttagt
aagattaaagatggttataacccatcaacttggatgttagaggtgacttcggcagcacaa
gaggtagctctaggagtgaacttcactgaagaatacaagaactcagaactgtataggaga
aacaaggcattgatcaaggaactgagttcaccccctccagggtcaaaagacctttacttc
tcaactcaatattcacaatctttcttcacacaatgtttggcttgcctatggaaacagcac
tggtcatattggagaaacccagcatacactgccgtgagattgttcttcgcaaccttcata
gctttaatgcttgggacaatattctgggattttggctccaaaaggaaaacgcaacaggat
ctcttcaatgcaatgggttgtatgtatgtttcagttatcttcattgggatacaaaattct
ttatctgtacaggcagttgtagccattgagagaacagtcttttacagagaaagagcagct
ggaatgtattcagctttcccatatgcctttggacaggttatgattgagctcccacacata
ttcatccaaaccataatctttggacttatagtatatgccatggttgggtttgagtggaca
gtcactaaattcttctggtatcttttcttcatgtacttcaccttcttatacttcacattc
tatgggatgatggcagtagccattactcctaaccaacacatctccggcatagtttcctct
gctttctatggattatggaacctcttctcgggattcatcattccgcacacaaggattcca
gtgtggtggaaatggtacttctggtcatgtccggtgtcttggactttgtatgggttgctt
gtcacacaatttggggacataaaggagaggcttgagagtggggaaagagtagaagatttc
gtaaggagctactttgggtatagaaatgactttgtgggagttgttgcaggcatcgtagtt
gggataactgtgctgtttggattcatcttcgcctactcaatcagggcttttaacttccag
aaaagatga
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