Vitis riparia (riverbank grape): 117912154
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Entry
117912154 CDS
T07274
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117912154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117912154
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
117912154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_25
AAA_16
AAA
AAA_28
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
117912154
NCBI-ProteinID:
XP_034682533
LinkDB
All DBs
Position
4:4583158..4590268
Genome browser
AA seq
1442 aa
AA seq
DB search
MESSDISRVTSVRITASNILRNSSVEVFSRSSRGEDDEEALKWAALEKLPTFLRIQRGIL
TEEKGQAREIDIKSLGLRERKNLIQRLVKIDGHDNEKILLKLKERIDRVGLDIPTVEVRF
EHLTVDAEAYVGSRALPTIFNFSANILEGFLNYLHILPSRKKPFSILHDVSGIIKPRRMT
LLLGPPSSGKTTLLLALAGRLGSDLKVSGRVTYNGHGMDEFVPQRTSAYTSQYDLHAGEM
TVRETLDFSARCQGVGGLSDMLAELSRREKAANIKPDPDIDIYMKAAALEGQKTSVVTEY
MLKILGLEICADTLVGDVMIRGIPGGQKKRLTTGEILVGPARALFMDEISTGLDSSTAFQ
IVNSLRQSIHILNGTAFISLLQPAPETYNLFDDITLLSDGKIVYQGPCENVLKFFEYMGF
KCPERKGVADFLQEVTSRKDQEQYWARKDEPYSYVTVKEFAEAFQSFHIGQKLGDELAVP
FDKTKGHPAALTTKKYGISKRELLRACTSREFLIMKRNSFVYIFKMIQLIIVAFISMTLF
LRTEMSRNTVEDGGIFMGALFFAVLRIMFNGLTELPMTIFQLPVFYKQRGLLFFPSWAYS
LPKWILKMPIAFAEVGDWVIMTYYVIGFDPNIERFFKQYLLLLCIHQMASGLLRLMAALG
RNIIVASTFGSFALLLVVVMGGFVLSKDDVKPWWEWGYWVSPLMYGQNAISVNEFLGDSW
RHVPANSTESLGVLVLKARGAFTEPHWYWLGVGVLIGYVLLFNFLFTLALSYLNPFGKPQ
PILSKETLTEKQANRTGELNELSPETGARIQSGSPRSLSARVGSITEADQRRKRGMVLPF
EPLSISFDEIRYAVDMPQEMKAQGVTEDRLELLRGVSGSFRPGVLTALMGVTGAGKTTLM
DVLAGRKTSGYIEGIIKVSGYPKKQETFARVLGYCEQTDIHSPHVTVYESLLYSAWLRLP
SEVDSATRKMFIEEVMELVELNSLREALVGLPSENGLSTEQRKRLTIAVELVANPSIIFM
DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYTG
PIGHHSSHLIKYFEGINGISKIKDGYNPSTWMLELTSAAQEAALGVNFTEEYKNSELYRR
NKALIKELSSPPPGSKDLYFSTQYSQSFFTQCLACLWKQHWSYWRNPAYTAVRLFFTTFI
ALMFGTIFWDSGSKRKRQQDLFNAMGCMYVSVIFIGIQNSLSVQAVVAIERTVFYRERAA
GMYSAFPYAFGQVMIELPHIFIQTIIFGLIVYAMVGFEWTVTKFFWYLFFMYFTFLYFTF
YGMMAVAITPNQHISGIVSSAFYGLWNLFSGFIIPHTRIPVWWKWYFWSCPVSWTLYGLV
VTQFGDIKERLESGERVEDFVRSYFGYRNDFVGVVAGIVVGITVLFGFIFAYSIRAFNFQ
KR
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggagagtagtgatattagcagagtaactagtgtacgtattactgcttctaacatactc
aggaacagctctgtggaagttttctcgaggtcttctcggggagaagacgatgaagaagcc
ctgaaatgggctgctctcgagaaactgcctacattccttcgtatacagagaggcatcctc
actgaagaaaagggccaggcaagggaaattgatataaagagccttgggttgcgagagagg
aagaatctgatccagcggcttgtgaagatcgatgggcatgataacgagaagatcttgttg
aagctcaaggagcggattgatcgagttggacttgatattccaacggttgaagttcgattc
gagcacttaacagttgatgcagaggcttatgttggaagcagagcattacccactatattc
aacttctcagcaaatattttggaggggttcttgaattatcttcacattcttcctagtaga
aagaaacccttctcaatcctccatgatgttagtggaatcatcaagcctcgcagaatgact
ttgcttctaggacctccaagctctgggaagactacactgttattagctttggcaggaaga
cttggttcagatctgaaggtttcgggcagagttacctacaatggccatggaatggatgag
tttgttccacagaggacttcagcttatacaagtcaatatgatcttcatgctggagaaatg
acagtaagagaaacattagatttttcagctagatgtcagggggttggaggcctttccgat
atgttagcagaattatcaagaagagagaaggctgcaaacatcaagcctgatcctgatatt
gatatctacatgaaggctgcagcactagaagggcagaagaccagtgtagtcacagaatat
atgctcaagattctaggacttgaaatctgcgcggatacattggtgggggatgtaatgata
cgaggcataccgggcggacaaaaaaagcgactcacaacaggggagatactggttggacca
gccagagcacttttcatggatgagatatcaactggtttggatagttcaacagcttttcag
attgtaaattcactcaggcagtccatccatattcttaatggaactgcttttatctctctc
ctccaaccagcaccagaaacatacaacctatttgatgatataactctcctctctgatgga
aaaattgtgtatcaaggtccctgtgaaaatgtgctcaagttctttgaatacatgggcttc
aaatgtccagaaaggaaaggagtggctgacttcttacaagaagtgacatcaaggaaggat
caagagcagtactgggcgcgtaaggacgagccttatagctatgttactgtcaaggaattc
gctgaagcgtttcaatcatttcatattggtcagaaactaggtgatgagcttgctgtgcca
ttcgataagaccaaaggccaccctgctgctttgacaaccaaaaaatatggtattagcaag
agagaactgttgagagcttgcacatccagggaattcttgattatgaagaggaattcattt
gtctatattttcaaaatgatccaacttattattgtggcttttataagcatgacattgttt
ctccgaactgagatgtcgcgaaatacagtagaagatggggggattttcatgggtgccctt
ttctttgcagtcttgaggattatgttcaatggattaacagagcttcccatgaccatcttc
caacttccagtcttttacaagcaaaggggccttctcttctttccctcctgggcatactct
ctacctaaatggatcctcaagatgccaatcgcatttgctgaagttggcgactgggtgatc
atgacttattatgtcataggctttgatccaaacatagaaaggttcttcaagcaatatttg
ctactgctatgcattcaccagatggcttcaggacttcttcggttgatggcggcattggga
aggaacatcatagttgcaagcacatttggctcatttgcattacttctagtcgtggttatg
ggtggatttgtcttgtcaaaagatgatgtgaagccatggtgggaatggggttattgggtc
tcacctttgatgtatgggcagaatgccataagtgtgaatgaattccttggggacagctgg
agacatgttccggctaactcaacagaatcattaggagtactagtcttgaaagctcgtggg
gctttcacagaaccacactggtattggctgggagtaggagttttgattggatatgtgctc
ctattcaatttcctcttcactttggctctatcatatctaaatccatttgggaagcctcaa
ccaattctatccaaggagaccttaactgagaaacaagctaacagaacaggagagttgaat
gagctgtcaccagaaacgggagcaagaattcaaagtggatcacccaggtcattgtctgca
agagtgggctccattactgaagctgaccagcgcaggaaaaggggaatggttcttcctttc
gaacctctgtctatctcttttgatgaaatcagatatgcagtggacatgccacaggaaatg
aaagcacaaggcgtcactgaggacagattggaacttctgagaggcgtgagcggttcattc
aggccaggagtccttacagccctaatgggtgttaccggtgctggaaaaactactctgatg
gatgtattggctggaagaaaaaccagtggatatattgaaggaattatcaaagtgtccggg
tatccaaagaaacaggaaacttttgctcgtgtgttgggatattgtgagcaaactgatatc
cactctcctcacgttacagtctatgagtccttgctttattctgcatggcttcggttacct
tctgaagtcgattcggcaaccaggaagatgttcattgaggaggttatggagcttgtggaa
ctaaactcattgagggaagcacttgttggattgcccagtgaaaatggtctgtcaacagag
cagcgcaagagactgaccattgcagttgagcttgttgccaacccatctataatattcatg
gatgagccaacatctgggcttgatgccagggcagcagcaatagtgatgagaacagtgagg
aacacagtggacacaggaagaactgtagtgtgcaccatccaccagccaagcatagatata
tttgatgcctttgatgagctacttctcttgaaacggggaggtgaagaaatttacacaggc
ccaataggtcaccattcttcccatctgatcaagtactttgagggaattaatggaattagt
aagattaaagatggctataacccatcaacttggatgttagagttgacttcggcagcacaa
gaggcagctctaggagtgaacttcactgaagaatacaagaactcagaactgtatagaaga
aacaaggcattgatcaaggaactgagttcaccccctccagggtcaaaagacctttacttc
tcaactcaatattcacaatctttcttcacacaatgtttggcttgcctatggaaacagcac
tggtcatattggagaaacccagcatacactgccgtgagattgttcttcacaaccttcata
gctttaatgtttgggacaatattctgggattctggctccaaaaggaaaaggcaacaggat
ctcttcaatgcaatgggttgtatgtatgtttcagttatcttcattgggatacaaaattct
ttatctgtacaggcagttgtagccattgagagaacagtcttttacagagaaagagcagct
ggaatgtattcagctttcccatatgcctttggacaggttatgattgagctcccacacata
ttcatccaaaccatcatctttggacttatagtatatgccatggttgggtttgagtggaca
gtcactaaattcttctggtatcttttcttcatgtacttcaccttcttatacttcacattc
tatgggatgatggcagtagccattactcctaaccaacacatctccggcatagtttcctct
gctttctatggattatggaacctcttctcgggattcatcattccgcacacaaggattcca
gtgtggtggaaatggtacttctggtcatgtccggtgtcttggactttgtatggattggtt
gtcacacaatttggggacataaaggagaggcttgagagcggggaaagagtagaagatttc
gtaaggagctactttgggtatagaaatgactttgtgggagttgttgcaggcattgtagtt
gggataactgtgctgtttggattcatcttcgcctactcaatcagggcttttaacttccag
aaaagatga
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