Vitis riparia (riverbank grape): 117912364
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Entry
117912364 CDS
T07274
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117912364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117912364
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
117912364
Prokaryotic type
Archaeal type
TFB
117912364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
117912364
NCBI-ProteinID:
XP_034682811
LinkDB
All DBs
Position
4:18667334..18675903
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AA seq
542 aa
AA seq
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MRCPYCTAAQGRCGTTGSGRLVTECTSCGRVMEERQSQIHHLFHLRAQDTPLCLVTSDLP
PPPPQQAQTAQEQEDDPFESTGFISAFSTWSLDPCPIFARSCLSFSGHLAELERVLESSS
SSSSSSAAAAAASSSSLASSGPAVVVDNLRAYLQIIDVASILGLDYDIADHAFELFRDCS
SATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQ
PINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQL
EDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTAITSGRS
SAPRVDLIEIVSCLDRDKQPESKPSKQNETLETSHQARGKEDTECKGNCQGAHTLGLNRP
TTFWQLPIPFGGSGFRTSGEKNQIVSGGMDLNEGGANPQELEQKLDNGAKAATVSVRAEQ
FPSAPPSSGSSITWPFRQPPSSGSSSSYAQLMQSLKVASGFPELKGSGNQNGSKGGGQCE
DP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcccgtactgcacggcggcgcaggggcggtgcggcaccacggggtcaggccga
ttggtgacggagtgcacctcctgcggacgagtcatggaagagcgccaatcccaaatccac
cacttattccaccttcgagcccaagatacccctctctgcctcgtcacttcagacctccca
ccacctcctcctcagcaagcccagaccgcccaggaacaagaagatgatcctttcgagtcc
accggcttcatctccgccttctccacctggtccctcgacccatgcccaatcttcgcccgc
tcgtgcctttccttctcaggccaccttgctgaactcgagcgtgttctcgaatcatcatca
tcatcctcatcttcttctgctgctgctgcggcagcgtcgtcttcgtctctggcctcctct
ggacctgcggttgtggtcgataatcttagggcttatctgcagatcatagacgtggcctcc
attttggggttggactatgatatagcggaccacgcatttgagctgttcagggactgttct
tcggctacctgtttgaggaatcgcagtgtggaggctcttgccactgctgctcttgttcag
gccattagggaggcccaggagcccagaactcttcaggaaatctcaattgcagccaatgta
ccccagaaggagatagggaagtacatcaagatactgggagaagctctacaactaagccag
cccattaatagtaattccatatcagtccatatgccaagattttgtacgcttctacagctc
aacaaatctgctcaggaactggcgacacacattggagaagttgtgatcaacaaatgcttc
tgtactcgaaggaaccccattagcatttctgcagcagctatatacttggcctgccaacta
gaagacaagcgcaagacccaggccgagatttgtaaggtgacgggtctaactgaggtcact
cttcgaaaagtttacaaggagctattagagaattgggacgatcttctcccttccaattat
actccagctgtccctccagagaaagcatttcccacaactgcaattacctctggccgttct
tcagcacctagagttgatcttatagaaattgtttcttgtctggacagggataagcagccc
gaaagcaaaccaagtaaacagaacgagaccttggaaacttcccaccaggccagaggcaaa
gaggacactgaatgtaaagggaactgtcaaggagcccatacacttggtttgaaccggcca
acaactttctggcagctcccaatcccatttgggggttctggttttaggacatcaggggag
aagaatcaaattgtgagtggaggaatggacttgaacgagggtggggctaatcctcaagag
ttggagcagaagttagacaacggcgcaaaggctgcaactgtttctgtgagggctgagcag
tttcctagtgccccgccttcaagtgggagttccataacgtggccatttcggcaaccacct
tcatcaggatcttcttcttcatatgctcaacttatgcaatcattgaaggtagcatcaggt
tttccagagcttaaaggatctggaaatcaaaatggaagtaaaggtggtgggcaatgtgag
gatccctag
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