Vitis riparia (riverbank grape): 117912416
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Entry
117912416 CDS
T07274
Name
(RefSeq) ribosomal RNA small subunit methyltransferase, mitochondrial
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117912416
Enzymes [BR:
vri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
117912416
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117912416
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_12
Methyltransf_11
MTS
PrmA
Methyltransf_31
CMAS
UPF0020
Ubie_methyltran
PCMT
Methyltransf_23
TRM5-TYW2_MTfase
Methyltransf_4
DREV
Methyltransf_18
FtsJ
Cons_hypoth95
NodS
GCD14
Spermine_synth
DUF1780
GidB
Methyltransf_28
Methyltransf_24
Methyltransf_32
tRNA_U5-meth_tr
BpsA_C
DOT1
Motif
Other DBs
NCBI-GeneID:
117912416
NCBI-ProteinID:
XP_034682878
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Position
4:complement(19811811..19813562)
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AA seq
383 aa
AA seq
DB search
MHGPSHFLRHLTGFLLRRHLLHTKPGRRYVPRNDDVQKKDNGEKHMFLYKSWGQHVLTNP
RVLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQRVVAVELDARMVEILRKRVAEHG
LEDQLTVICKDALKTDFPQFDLVVANIPYGISSPLVAKLVFGANPFRSATLLLQKEFARR
LLANPGDSEFNRLAVNVKLVAEVEFVMDVSKRDFLPCPKVDSSVVTIRPKAEVPDVDLNE
WCAFTRTCFSKKNKTLGATFKHKRRVMELWRLSNLRGSETGNAVSGCNYDCSYDEDKEEE
EGNESDEGNGDPYPGSEMEMSLFKEKINGVLKLGGFDDKRPAKLSGKELLQLLSLFNQAG
IHFHDQAKPRNADNIAVAASYST
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcccaagtcatttcctgcgccacctcacgggattccttctccggcggcacctt
ctccacacaaaacccggtcgtcggtacgttcccagaaacgacgacgtccagaagaaagac
aatggagaaaagcacatgtttctatacaagagttggggtcaacacgtcctaaccaaccca
agggttctcgacaccatcgttcgaaaatcaaatataaagcccacagataccgtccttgag
atcggacccggcactggaaatctcactctaaggcttcttcaagcagcacaaagggtcgtt
gcagttgagttggatgctagaatggtggaaattctccgtaaacgtgttgctgaacatggt
cttgaagatcagctcactgttatatgtaaagatgcattgaagacggattttcctcagttt
gatcttgttgtggccaacatcccgtatggaatatcttcgcctctggtggctaaattggta
ttcggggcgaacccatttcgaagcgccacgcttctccttcaaaaagagttcgcacggcgg
ctgttggctaaccccggcgactcagagttcaaccgtctggctgtgaatgtgaagttggtg
gctgaagttgagtttgttatggatgtaagcaagagggactttcttccatgtccaaaagtt
gactcttccgtggttacaatacgtccgaaagccgaagttccggatgtggatttgaatgaa
tggtgtgctttcacgagaacgtgttttagtaagaagaataagacattgggtgcaacgttt
aagcataagagaagggtgatggagctttggagattgtccaatttgaggggttcagagaca
ggaaatgcagtcagtgggtgcaattatgattgtagttatgatgaagataaagaagaggaa
gaagggaatgagagtgatgaagggaatggtgatccatatcccgggtcagaaatggagatg
agtctgttcaaagagaagataaatggggttctgaaattaggtgggtttgatgataagagg
cctgcaaaactgtctgggaaggagctgctgcaactgctttccttattcaatcaagctgga
atccattttcatgatcaagcaaagccaaggaatgcagacaatatagctgttgcggcttct
tacagcacatag
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