Vitis riparia (riverbank grape): 117912470
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Entry
117912470 CDS
T07274
Name
(RefSeq) ras-related protein Rab5
KO
K07887
Ras-related protein Rab-5A
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04144
Endocytosis
vri04145
Phagosome
vri04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117912470
04145 Phagosome
117912470
04148 Efferocytosis
117912470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117912470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117912470
04031 GTP-binding proteins [BR:
vri04031
]
117912470
Membrane trafficking [BR:
vri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117912470
Endosome - Lysosome transport
117912470
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117912470
Exosomal proteins of other body fluids (saliva and urine)
117912470
Exosomal proteins of colorectal cancer cells
117912470
Exosomal proteins of bladder cancer cells
117912470
GTP-binding proteins [BR:
vri04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117912470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_24
TsaE
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117912470
NCBI-ProteinID:
XP_034682943
LinkDB
All DBs
Position
4:11931148..11956354
Genome browser
AA seq
200 aa
AA seq
DB search
MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFSRAKKWVQELQKQGNPNMVMAL
AGNKADLEDKRKVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKRLPRAQPAQNP
AGMVLVDRPAESSQAASCCS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatcggccacaacaatctcaatgcaaaattggttcttcttggtgacatggga
gccggaaagtccagtctcgtcttgcgctttgtcaagggccagtttcttgaattccaggaa
tctacaattggagcggcgttcttttcacagacactagcggtaaatgatgccacagtgaag
tttgagatatgggacacagctgggcaggagaggtaccacagcttagctccgatgtactat
agaggtgctgctgcggccataattgtctatgacattactagcacagagtcattttcacgg
gcaaagaagtgggtgcaagaacttcagaaacaaggtaaccctaacatggttatggcgctt
gctgggaacaaagctgatttagaagataagaggaaagtgactgctgaagaggcacgtgtc
tatgctgaggaaaatggccttttcttcacggagacctctgccaaaacagccgtaaatgtc
aatgatacattttatgaaatagctaagagattgcccagagctcagcctgctcagaatcca
gctgggatggttctggtggacagaccagcagaaagttcccaagctgcatcatgctgttcc
taa
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