KEGG   Vitis riparia (riverbank grape): 117912470
Entry
117912470         CDS       T07274                                 
Name
(RefSeq) ras-related protein Rab5
  KO
K07887  Ras-related protein Rab-5A
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04144  Endocytosis
vri04145  Phagosome
vri04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117912470
   04145 Phagosome
    117912470
   04148 Efferocytosis
    117912470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117912470
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117912470
   04031 GTP-binding proteins [BR:vri04031]
    117912470
Membrane trafficking [BR:vri04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117912470
 Endosome - Lysosome transport
    117912470
Exosome [BR:vri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117912470
  Exosomal proteins of other body fluids (saliva and urine)
   117912470
  Exosomal proteins of colorectal cancer cells
   117912470
  Exosomal proteins of bladder cancer cells
   117912470
GTP-binding proteins [BR:vri04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117912470
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_24 TsaE AAA_16 ABC_tran
Other DBs
NCBI-GeneID: 117912470
NCBI-ProteinID: XP_034682943
LinkDB
Position
4:11931148..11956354
AA seq 200 aa
MATIGHNNLNAKLVLLGDMGAGKSSLVLRFVKGQFLEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESFSRAKKWVQELQKQGNPNMVMAL
AGNKADLEDKRKVTAEEARVYAEENGLFFTETSAKTAVNVNDTFYEIAKRLPRAQPAQNP
AGMVLVDRPAESSQAASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcgaccatcggccacaacaatctcaatgcaaaattggttcttcttggtgacatggga
gccggaaagtccagtctcgtcttgcgctttgtcaagggccagtttcttgaattccaggaa
tctacaattggagcggcgttcttttcacagacactagcggtaaatgatgccacagtgaag
tttgagatatgggacacagctgggcaggagaggtaccacagcttagctccgatgtactat
agaggtgctgctgcggccataattgtctatgacattactagcacagagtcattttcacgg
gcaaagaagtgggtgcaagaacttcagaaacaaggtaaccctaacatggttatggcgctt
gctgggaacaaagctgatttagaagataagaggaaagtgactgctgaagaggcacgtgtc
tatgctgaggaaaatggccttttcttcacggagacctctgccaaaacagccgtaaatgtc
aatgatacattttatgaaatagctaagagattgcccagagctcagcctgctcagaatcca
gctgggatggttctggtggacagaccagcagaaagttcccaagctgcatcatgctgttcc
taa

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