Vitis riparia (riverbank grape): 117912509
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Entry
117912509 CDS
T07274
Name
(RefSeq) retinoblastoma-related protein isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117912509
Transcription factors [BR:
vri03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
117912509
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
117912509
NCBI-ProteinID:
XP_034682997
LinkDB
All DBs
Position
4:complement(2437111..2444568)
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AA seq
1013 aa
AA seq
DB search
MDGVKPVASAEQGGAVEARFTEFCKVFTNGLQLDESTFAQAMKLFEESNHLLSTTSLSAI
GNGPEDSERYWFAFILYSVKRLSEGTAENVQQGNDENGFNLCQILRVSKLNIVDFFKELP
QFIVKVGPILGNLYGPDWEKRLEAKELQANFVHLSILSKYYKRAYLEFFSTSGSNLDKQS
SVISASGYVSDYHRFGWLLFLALRVHAFSRFKDLVTCTNGLVSILAILILHVPISFRSFT
INNYPRFVCCSVKKGNKGMDLLASLCDIYETSEDEVRKTMEQTNKVIVDILKKKPCLASE
CKSENLASIDPDGLVYFEDLMDESSLSSSINILEKDYDAAIRNKGELDERVFINGEDSLL
GSGSLSGGAMSISGAKRKIDSLASPAKTITSPLSPNRSPGILGGANSKMAPTPVTTAMTT
AKWLRTVISPLPAKPSAELERFLTSCDKDVTSDVIRRANVILEAIFPSIAFGERCVTGSA
SLMDSIWAQQRRMEAMKLYYRVLEAMCTAEAQVLHANNLTSLLTNERFHRCMLACSAELV
LATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVW
EKGSSMYNSLIVARAALSAEVNRLGLLAEPMPSLDAISMHINASCGGLPPVPSLQKRESS
PGQNGDIRSPKRVCPDYRSVLVERNSFTSPVKDRFLALNNLKSKLPPPPLQSAFASPTRP
NPGREGETCAETGINIFFSKIIKLAAVRINGMVERLQLSQQMRENVYCLFQQILNRRTSL
FFNRHIDQIILCCFYGLAKISQMNLTFREIIHNYRKQPQCKPQIFRSVFVDWSSARRNGK
TGKEHVDIITFYNEIFIPAVKPLLMEIGPGGGTTTKTNRVPEVNNNNDAQCPESPKISPF
PSLPDMSPKKVSAAHNVYVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLTAIN
NRLNSTRKLRGALNFDDVEGLVSDSLVAKSLYLQNGSCASSSGAPLKLEQPDT
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtcaagccagttgcttcggctgagcaaggaggtgctgttgaagctcgattt
acagagttctgcaaggttttcacgaatgggttacaattggatgagagcactttcgcacaa
gctatgaagctgtttgaggaaagcaatcacctactgtctactacaagcctgtctgcaatt
gggaatgggccagaagattctgaacggtattggtttgcattcattttgtattccgtcaag
agattgagtgaagggactgcagaaaatgttcagcaagggaatgatgaaaatgggtttaat
ttgtgccagattttgagggtttcaaagctcaacattgtcgatttcttcaaagagcttcca
cagttcatcgtcaaggttggtccaattcttggaaatctatatggccccgattgggagaaa
aggcttgaggcaaaggagttgcaggccaattttgtgcacttgagtattctaagcaagtac
tataagcgtgcatacctggaattcttctccacaagtggttccaaccttgataagcagtcg
tctgttatcagtgcttcaggctatgtatcagactatcatcggtttggatggttactgttt
ttggcgttacgtgttcacgcatttagtcgatttaaggacctagtgacttgcacaaatggc
ttggtttctatattggctatcctgatacttcacgtgcctatttccttcagaagtttcact
atcaacaactatccacgttttgtatgttgttcagttaagaaaggcaataaaggtatggat
ctgcttgcatccctttgtgacatttatgagacatcagaagatgaagtaagaaaaacaatg
gagcagaccaacaaagtaatagtcgatatcttgaagaagaaaccttgtttggcatcagag
tgtaaatctgaaaacttagcgagtattgacccagatggtttggtttattttgaagatcta
atggacgaatcatctttatcatccagtataaatattctagagaaagattatgatgctgca
attcgtaataagggtgaactggatgagagggtattcattaatggggaggatagcttactt
ggctcagggagtttgtctggcggtgccatgagtataagtggtgccaagaggaaaattgat
tcactggcctccccagcaaagacaattacaagtccactgtctcccaaccgctcgcctggc
attcttggtggtgctaactcaaagatggcaccgacacctgtgaccacagctatgactact
gcaaagtggctccggacggttatttctccgcttccagcaaagccctctgccgaactggag
cgattcctaacatcatgtgacaaggatgttactagtgatgtgatccgcagggctaacgta
atattggaggccatttttccaagtattgcttttggagagcgttgtgtcactggaagtgcg
agtctgatggacagcatatgggcacaacaaagaagaatggaagcaatgaagttatactat
agggtgttggaagcaatgtgtaccgctgaagctcaagttttgcatgcaaataatttaacc
tccttattaaccaatgagaggttccataggtgtatgcttgcttgttctgcagagctggtt
ttggctacccataagacagttacaatgttgttccctgcagtgttggagagaactggcatc
acagcttttgatcttagcaaggtgatagaaagtttcattagacatgaggagtctcttcca
agggaattgaggcgtcatcttaattccttggaagagcgacttttggaaagcatggtatgg
gagaagggctcctctatgtataattctttgatagttgcaagggcagccctttccgcagaa
gtaaaccggcttggattattagcagaacctatgccatctttggatgctatttccatgcat
attaacgcttcctgtggtggcttgcctcctgtgccttctttgcagaagcgtgagagttca
ccaggtcagaatggagatattcggtccccaaagagagtgtgccctgattatcgaagtgtg
ttggtggaacggaattcttttacgtccccagtaaaggatcgcttcctggcattaaataat
ctcaagtccaagttaccgcctccccccttgcaatctgcatttgcaagtccaacacggcca
aatccaggacgcgaaggggaaacatgtgcagaaactggcatcaatatattctttagcaag
ataataaagttagctgctgtcagaatcaatggtatggttgagaggctacaactgtctcaa
cagatgcgagagaatgtgtactgtcttttccaacaaatccttaatcggcgaacgagtctc
ttctttaaccggcatattgatcagatcatcctctgttgtttctatgggcttgcaaagatc
tctcaaatgaacctgaccttcagggaaataattcacaactacaggaagcagccacaatgc
aagccacaaattttccgtagtgtgtttgttgattggtcatcagcacgccgcaatggaaaa
acagggaaggaacatgttgatattatcacattttacaatgaaatttttattccggctgta
aagccgctgttaatggagattgggcctggtggtggaacaactacaaaaactaacagggtt
cctgaagttaacaataacaatgatgcccaatgtcctgaatcaccaaagatttctcctttt
ccaagtcttcctgacatgtctccgaagaaagtatccgctgcacacaatgtctatgtctcc
ccattgcggtcatctaagatggatgctttaatctcacatagttctaaaagttactatgct
tgtgttggagagagtactcatgcttatcagagcccttcaaaagacctaactgccattaat
aaccgtttgaatagtacccggaagctcagaggcgcactcaacttcgacgatgtcgagggt
ttagttagcgactccttggtggccaaaagcctgtaccttcaaaatgggagctgtgcatcc
tcatcaggtgcaccgttgaaattagagcaacctgacacgtag
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