Vitis riparia (riverbank grape): 117912555
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Entry
117912555 CDS
T07274
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117912555
03041 Spliceosome [BR:
vri03041
]
117912555
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117912555
Spliceosome [BR:
vri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117912555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_10
RRM_8
RRM_DEAH11
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117912555
NCBI-ProteinID:
XP_034683078
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All DBs
Position
4:complement(2541733..2562096)
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AA seq
437 aa
AA seq
DB search
MQQRFKQQQQQQQQTLMQQALLQQQHMYHPGVLAAAAMSQMEPVPSGNLPPGFDSSSCRS
VYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGFVDYLDRASASLAIMTLHGRQ
VYGQALKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHK
TGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVV
LTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAELHCQFHALGAGVIEEVRIQR
DKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPTPLGTASNPLPPPAQPYQIL
PTAGINQGYSPAELLAYQRQLALSQAAASSLSGQALMQMTGHHGLAAGSMGVSSGGTQAM
YDGYPNNSSGQQLMYYH
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaggtttaagcagcagcagcagcaacaacaacaaaccctaatgcagcaagca
ttgcttcagcagcagcatatgtaccacccgggtgtactcgctgcggctgccatgtctcaa
atggagcctgttccaagcggcaacctgcctcctggctttgattcatcgtcatgccgcagt
gtttatgtaggtaatattcatgtaaatgtcactgagaaacttcttgcagaagttttccaa
agtgctggtcctcttgctggatgcaaactcattagaaaggataagtcgtcatatggtttt
gtggactaccttgatcgagcatctgctagtcttgcaataatgacattgcatggacgtcaa
gtttatggtcaagcacttaaggtgaattgggcatatgccagtggccagagggaagacacg
tcagggcactttaatatatttgttggtgatttgagcccagaggttactgacgcaacttta
tatgcctgcttctcagtttttgctagttgttcagatgcaagggtcatgtgggatcacaaa
actggacggtcaaaaggatatggctttgtttctttccgtaatcagcaggatgcacagagt
gccatcaatgacttgagtggtaaatggcttgggaataggcaaataagatgcaactgggca
actaaaggtgctggctttaatgaggacaagcaggttaatgaaaatcaaaacgcagttgta
cttactaatggatcttcagatggaagtcaagagaatacaaatgaggaggcccctgaaaat
aatccagcatacactactgtctatgttggcaacctttctcatgaggtaactcaagctgaa
cttcactgtcagtttcatgctcttggagctggggttattgaggaagtgcgcatccagagg
gataaaggttttgggtttgtcaggtaccacacccatgaagaagcagccttggccattcag
atggcgaatggaaggatagttcgtggaaaatccatgaagtgctcatggggtagcaagcca
acgcctctcggtacagcttctaatcccctacctcctccagctcaaccatatcagatcctt
cctactgctggcattaaccaaggctactcaccagcagagttgttggcctatcagcgccaa
cttgccttaagccaagctgctgcatccagcctctcgggccaagctcttatgcagatgact
ggacatcatggtctagctgcaggttccatgggtgtgagctctggtggcacccaagctatg
tatgatggatatcctaataattcatcaggccagcagctgatgtattatcattaa
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