Vitis riparia (riverbank grape): 117912662
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Entry
117912662 CDS
T07274
Name
(RefSeq) protein DDB_G0276689
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117912662
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117912662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
TPR_14
Motif
Other DBs
NCBI-GeneID:
117912662
NCBI-ProteinID:
XP_034683240
LinkDB
All DBs
Position
4:complement(4198607..4265933)
Genome browser
AA seq
1902 aa
AA seq
DB search
MERSTIDETESYHQKAIYYLKDMRNHMEAINNIPRKILMVTIIVSLLHMDDISLNLTNCA
SPGSYSELDIKSAWERTDLSTYEGGNKMVTSFIELLLDVLHNNLPSAALEQDHALAGGVT
TGGRQALEWKLSSARHFIDDWEWRLSILQSLLPLSERQWRWKEALTVLRAAPSELLNLCM
QRAKYDIGEEAVHRFSLSPEDRATLELAEWVDGTFRRASVEDAVSRAADGTSAVQDLDFS
SLRSQLGPLAAILLCIDVAATSVRSADMSLQLLNQAQVMLSDIYPGRAPKMGSTYWDQIH
EVGVISVTRRVLKRLHEFLEQDKPPALPAILSGEIIISSSKETYRQGQRERALAILHQMI
EDAHKGKRQFLSGKLHNLARAVADEETETRGEGPYTDRKVLLNFDKDGVLGLGLKAIKQT
PSSAAGENNMQPVGYDIKDTGKRLFGPISAKPTTFLSQFILHIAAIGDIVDGTDTTHDFN
FFSLVYEWPKDLLTRLVFDRGSTDAAGKVAEIMCADFVHEVISACVPPVYPPRSGHGWAC
IPVIPTCPKSNSENKVLSPSSREAKPNFYSRSSATPGVPLYPLQLDIVKHLVKLSPVRAV
LACVFGSSILYNGNDSSLSSSLNSGLLQAPDADRLFYEFALDQSERFPTLNRWIQMQTNL
HRVSEFAITAKHTDNDSMVIPEARTAIKRFREHDSDTESEVDDIVNSSNLSTTFTDFNSQ
TSVAPDNLWRDSPKHEISEDTTVFLSFDWENEVPYEKAVERLIDEGNLMDALALSDRFLR
NGASDRLLQLLIERGEENHSGSGQPQGYGGPSIGSNSWQYCLRLKDKQLAARLALKYLHR
WELDAALDVLTMCSCHLTQSDPIRNEVLQMRQALQRYNHILCADDHYSSWQEVAAECKED
PEGLALRLAGKGAVSAALEVAESAGLSIELRRELKGRQLVKLLTADPLNGGGPAEASRFL
SSLCDSDDALPVAMGAMQLLPNLRSKQLLVHFFLKRRDGNLSDVEVSRLNSWALGLRVLA
ALPLPWQQRCSSLHEHPHLILEVLLMRKQLESASLILKEFPSLRNNNVIIAYAAKAVSIS
SPSREPRISVSGPRPKQKTRAGAPTRSSFSSSLSNLQKEARRAFSWTPRNTGEKAAPKDV
YRKRKNSGLSPSERVAWEAMTGIQEDRVSSFSADGQERLPSVSISEEWMLTGDTNKDIAV
RSSHRYESAPDIILFKALLSLCSDELVSAKGALDLCVNQMKNVLSSHQLPENATVETVGR
AYHATETFVQGLFFARSLLRKLAGGSDLSSNPERSRDADDTSSDAGSSSMGSQSTDELSE
VLSQAEIWLGRAELLQSLLGSGIAASLNDIADKESSAHLRDRLIVDEQYSMAVYTCKKCK
IDVFPVWNAWGHALIRMEHYAQARVKFKQALQLYKGDPAPVILEIINTIEGGPPVDVSAV
HSMYDHLARSAPTILDDSLSADAYLNVLYMPSTFPRSERSRRALESASSNSIYSPDFEDG
PRSNLDSLRYLECVNYLQEYARQHLLTFMFRHGHYNDGCMLFFPTNAVPPPPQPSNHGVV
TSSSSPQRQDLLATDYGSIDDLCDMCIGYGAMSVLEEVISTRMLSTNLQDVAVNQYTAAA
LARICTYCETHKHFNYLYQFQVIKKDHVAAGLCCIQLFMNSSSQEEAIKHLEHAKMHFDE
GLSARHKAGDSTKLVTKGIRGKSASEKLTEEGLVKFSARISIQVDVVKSFNDSDGPQWKH
SFFGNPNDPETFRRRCEIAETLVEKNFDLAFRLIYEFNLPAVDIYAGVAASLAERKKGGQ
LTEFFRNIKGTIDDDDWDQVLGAAINVYANRHKERPDRLIDMLTSSHRKVLACVVCGRLK
SAFQIASRSGSVADVQYVAHQALHANALPVLDMCKQWLAQYM
NT seq
5709 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggagtacaattgatgaaacagaaagctaccaccaaaaagctatatactatttg
aaagacatgaggaaccatatggaggccattaataatatcccacgcaagatattgatggtg
accattattgtctcacttttgcatatggatgatatctctctcaatttgacaaattgtgcc
tcacctgggagctattctgaattggacattaagtctgcttgggaacgtactgatctttct
acttatgaagggggtaacaaaatggtcacatctttcatagagttgctacttgatgtatta
cataataatttaccatctgctgcgttggaacaagatcatgcattggctggtggtgtcact
actggtggaagacaggccttagaatggaaactctcaagtgctagacatttcattgatgat
tgggaatggcgcttgtcaattttgcaaagtcttttacctttatctgaacgccagtggaga
tggaaggaagcattaactgtgttgcgtgcagctccatctgagctacttaacctctgtatg
caaagggcaaagtatgatataggagaagaggctgtccatcgattttccttatctccagaa
gatagagctactcttgaattagctgaatgggtagatggtaccttcagaagagcatctgta
gaagatgctgtgtctcgtgctgctgatggaacttctgctgtgcaagatttagatttttcc
tctttacgttcgcaattaggtcctttggctgcaattcttctttgtattgatgttgctgca
acttctgtaaggtccgcagatatgtccctccagcttctgaatcaggctcaagtaatgtta
tctgatatatatccaggacgagctccaaagatgggctccacttactgggatcagatccat
gaagttggagtaatttctgtgacaaggcgagttctcaagcgtctgcatgagttcttggag
caggataaacctcctgctcttccagcaattttgtctggagagataataatttcatcatca
aaggagacttatcgacaaggacaaagggaacgcgctcttgccatactccatcagatgatt
gaagatgctcacaagggcaagcggcagtttctgagtggtaagcttcataatcttgcaaga
gctgttgctgatgaagaaacagaaacaagaggggaaggcccctatactgatcggaaagtt
cttttaaactttgacaaggatggggttcttgggcttgggctgaaagctatcaaacagaca
cccagttcagcagctggagaaaacaatatgcaacctgtgggttatgatatcaaagatact
ggaaaaaggctttttggtcccataagtgcaaagcccacaacttttctttcacaatttata
ctccatattgctgcaattggtgacatagttgatgggacagatacaactcatgatttcaat
tttttctcgcttgtgtatgagtggcctaaagatcttttaactcgtctggtctttgaccga
ggcagcactgatgcagctggaaaggtagcagaaattatgtgtgctgattttgtccatgaa
gtgatttctgcatgtgtacctccagtttatcctccaagatctggtcatggatgggcatgc
attccagtgattcctacctgtcctaagagtaactcagaaaacaaagtgctttctccctct
tctagagaagcaaagcctaatttttacagccgttcctctgcaacacccggtgtccctcta
taccctctccagttggatatagtgaagcatttggttaaactatcaccagtgagggccgtc
ttagcatgtgtttttgggagtagtatattatacaatggcaatgattcatctctctctagt
tccttgaatagtggattactgcaggcacctgatgctgacaggttattttatgagtttgct
cttgatcaatcagaaaggttcccaactttgaaccgatggatacaaatgcaaaccaatctt
catcgagtttcagagtttgctatcactgctaaacatacagataatgatagtatggttata
cctgaagcaagaactgctatcaagagatttcgtgaacatgacagtgatactgagtcagag
gttgacgatattgtcaatagcagtaatctttcaacaacttttactgacttcaacagtcaa
actagtgtggctcctgacaacttgtggcgtgattctccaaaacatgaaatttctgaagat
acaacagtgttcctttcttttgattgggaaaatgaagtaccctatgagaaagctgtagag
cgattaattgatgaaggaaacttgatggatgctcttgctctttcggatcgctttttgcgc
aatggagcctcagatcggttacttcagctactcattgaacgtggggaagaaaaccattca
ggatctggacaacctcaaggttatggaggccctagcattgggagcaacagttggcagtat
tgcctgcggttgaaggataaacagctggcagctagacttgccctcaagtatttgcacaga
tgggaactggatgctgctttggatgttcttaccatgtgcagttgccacttgactcaaagt
gatccaattaggaatgaggtcctgcaaatgagacaagctctgcagaggtacaatcacatt
ttatgtgcagatgatcattatagcagctggcaagaggttgcagctgagtgcaaggaagat
cctgagggcttggcacttagattagctggaaaaggagctgtttctgctgctttagaagta
gctgaaagtgcaggattatcaatagagttgcggagggaattgaaaggtcgacaacttgtg
aaacttctcactgccgacccccttaatggtggaggtccagcagaagcttcacgatttctt
tcttcactatgtgactctgatgatgctctaccagttgcaatgggtgctatgcagctctta
cctaacctgcggtcaaaacaacttcttgttcactttttcttgaagagaagagatggtaat
ttatctgatgttgaggtttccaggcttaactcatgggccttaggtcttcgtgttctggcc
gccttgccattgccatggcagcaaagatgttcttccctgcatgagcaccctcatttaata
cttgaagttctgctgatgaggaaacaactggaatctgcttctctgatccttaaagaattt
ccttccttgagaaacaacaatgtaatcattgcatatgctgccaaagctgtcagcattagc
tcaccctccagagaacctcggatctctgtttcaggtcctagacctaagcaaaaaacaagg
gcaggtgcacctacaaggtcttctttttccagcagtctaagtaacttgcaaaaagaggct
cgtagagctttttcctggactccacgcaacactggagaaaaggctgctccaaaagatgtt
tacaggaaaagaaagaattctggattatcaccatctgaacgagttgcttgggaagccatg
actggtattcaggaggatcgtgtttcatcattctctgccgatggacaagaacggcttcct
tctgtatctatttctgaggaatggatgctgactggtgacaccaataaggatatagctgtt
cgttcatctcaccgatatgaaagtgctcctgacatcattctcttcaaggctctactttct
ttgtgttctgatgagttggtgtctgccaaaggtgcactggacttgtgtgttaatcagatg
aagaatgtattgagctcccaccaattgcctgaaaatgcaactgtggaaactgttggtcga
gcatatcatgccacagaaacctttgtacagggacttttctttgctagatctcttctgaga
aagcttgctgggggtagtgacttgtctagtaatcctgaaagaagtagggatgctgacgat
acttcctctgatgctggcagctctagtatgggcagtcaatccacagatgagctgtctgaa
gttctgtcacaagcagagatttggcttggacgtgctgagctgctacagagccttctggga
tcaggaattgctgcttctctcaatgatatagctgacaaagagtcatctgcacatctccgt
gacaggttgattgtagatgaacaatacagcatggctgtatacacttgtaagaagtgtaag
atcgatgtttttcctgtgtggaatgcatggggacatgctttgattcggatggagcactat
gcacaagcccgtgtgaaatttaagcaagctcttcagttgtacaagggcgatcctgcacct
gtcattctggaaatcattaatacaattgaaggaggtccccctgttgatgtttcagctgtt
cactccatgtatgatcatttggctagaagtgcaccaacaatcttggatgattctctttct
gcagatgcatatctcaatgtcctgtacatgccatctacatttcctcgttcagaaagatcc
aggcgagctctagaatctgcaagtagtaactccatatatagtcctgattttgaagatgga
cctcgcagcaacctggacagtctccgatatcttgaatgtgttaactatttacaagaatat
gcacgtcagcatttgcttacttttatgttcaggcatggtcattataatgatggttgcatg
ctgttctttcctacaaatgctgttcctcctcctcctcaaccatcaaatcatggtgtagtt
acttcatcttcatctcctcaaaggcaggatcttttggcaaccgattatgggtccattgat
gatttgtgtgacatgtgtattggatatggtgccatgtctgttttggaggaagtgatatca
acaagaatgttgtctacaaatctacaagatgtagcagtgaatcaatacactgccgcagca
cttgctcgtatttgcacctattgtgaaactcataagcatttcaattatctataccagttt
caggtaatcaagaaggaccatgttgctgctgggctttgctgtattcagttatttatgaat
tcttcttcacaagaggaagctataaaacatttagagcatgccaagatgcattttgatgaa
gggctgtcagcacgccacaaagctggcgattctactaaacttgtcaccaagggtatccga
ggaaagagtgcctctgaaaaacttactgaagaaggacttgtcaagttttctgctcggata
tcaatccaggttgatgttgtaaagtcttttaatgattcagatggaccacagtggaagcat
tctttttttggaaatccaaatgatcctgaaactttcaggagaagatgtgagattgcagag
actctagtggagaagaattttgatttggctttccgactgatatatgaattcaatcttcct
gctgttgatatatatgctggtgttgctgcatcacttgctgagagaaaaaagggtgggcaa
ttgacagaattcttcagaaacatcaaaggcactatcgatgatgatgattgggatcaggtc
ctaggggctgcaataaatgtatatgccaacagacacaaagaacgccctgatcggctcata
gacatgctgacaagtagccacaggaaggtgctggcttgtgtggtttgtgggcgtctaaaa
agtgccttccagattgcctctcgaagtggaagtgtggctgatgttcaatatgtagcgcat
caggcattgcatgcaaatgcactacccgtgctcgacatgtgcaaacaatggttggctcag
tacatgtaa
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integrated database retrieval system
