Vitis riparia (riverbank grape): 117912677
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Entry
117912677 CDS
T07274
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117912677
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117912677
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vri03041
]
117912677
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117912677
Spliceosome [BR:
vri03041
]
Common components
Common spliceosomal components
SR proteins
117912677
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
117912677
NCBI-ProteinID:
XP_034683252
LinkDB
All DBs
Position
4:21254868..21258186
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AA seq
228 aa
AA seq
DB search
MADSPRKRYSKSPSPWREQSRSRSRSRSRSRSWSRPRHRSRSRSRSRSRGRTETSNPGNT
LYVTGLSTRVTERALEDHFSREGKVASCFLVMEPRTRISRGFAFVTMETVEDANRCIKHL
NQSVLEGRYITVEKSRRKRARTPTPGHYLGLKNTRDSGYRGDRGRYRGGSGRDDYGSRRS
PRPSPYRGGRDYSPRRSPPRGRSRRDRSRSIPYSPYASPERGYGHRAR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctcgcaaaaggtattcaaaatctccttccccatggagagagcaatcc
cggtcaagatctaggtcaaggtcaagatccagatcctggtccagaccaaggcacaggtcc
aggtccagatcaaggtctaggagccgtggcaggactgaaacttcaaatcctggaaatacc
ctttatgtgactggcctatctactagggttacagagagggcccttgaagatcacttctcc
agggagggaaaggtggcttcatgttttctggtcatggagcctcgcacgcgcatttctcgt
ggatttgcctttgttacaatggaaactgttgaagatgccaaccgctgcatcaagcacctc
aatcaatcggttctagaaggtcgatacataactgtggagaagtcacggaggaaacgtgca
aggactccaacgcctggacactatcttgggctgaaaaatactagggattctggctatcgt
ggtgaccgtggtagatatcgtggtggttctggccgagatgactatggatctcggagatct
cccaggccctcaccttatagaggagggcgtgattattctcccaggcgatcacctccaagg
ggaagatcaagaagggacaggtcaaggtcgattccgtactctccttatgctagcccagaa
aggggctatggccaccgtgctagatga
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