Vitis riparia (riverbank grape): 117912726
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Entry
117912726 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: 26S proteasome regulatory subunit 8 homolog A-like
KO
K03066
26S proteasome regulatory subunit T6
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117912726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
vri03051
]
117912726
Proteasome [BR:
vri03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117912726
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
nSTAND3
PRS7_OB
AAA_22
RuvB_N
AAA_lid_PRS2_C
TIP49
AAA_28
NPHP3_N
AAA_33
AAA_3
AAA_24
Mg_chelatase
AAA_14
PhoH
Parvo_NS1
AAA_18
ATPase
AAA_11
AAA_7
ABC_tran
RNA_helicase
IstB_IS21
DUF815
AAA_17
AAA_19
AAA_25
TsaE
Sigma54_activat
OapC
bpMoxR
Zeta_toxin
DUF5906
Motif
Other DBs
NCBI-GeneID:
117912726
NCBI-ProteinID:
XP_034683309
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Position
4:complement(4440097..4451856)
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AA seq
469 aa
AA seq
DB search
MATAVTELSQSGPAMVGEVCTAKTTSSKQGDGLRQYYLQHIHDLQLQVRQKSHNLNRLEA
QRNDLNSRVRMLREELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKNIDITK
ITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL
PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG
SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEAS
NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKK
IAEKMNGASVQSLRTKKMWDMLAIFGLQWEFPESVKELLLGWKAHTELTNGLVPFSDTLD
KVASVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKXTEKNMSLRKLWK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcagtgaccgagctcagtcagtctggtccagccatggtcggggaggtctgc
accgccaaaacgacgtcgtctaagcaaggagatgggctgaggcagtactacctccaacac
atccacgatctccagctacaggttcgccagaagagccataatctcaatcgccttgaagcc
cagcgcaacgatctcaattcccgagtgaggatgctcagagaagaattgcagctgcttcaa
gagcctggatcatatgttggtgaagtagtcaaagttatgggaaaatcgaaggttttggtt
aaggttcatccagaagggaagtatgttgttgatattgataagaacatagacatcactaag
atcacaccttcaacccgagttgctcttcgcaatgacagctatgtgcttcacttgatattg
cccagtaaagtagatccactggtaaaccttatgaaagttgaaaaagttccggattctaca
tatgatatgattggtggtcttgatcagcaaatcaaagagataaaggaggttattgagctt
ccaatcaagcatcctgaattatttgaaagtcttggtatagctcaaccaaagggagtcctg
ctttatggtcctcctggtacagggaaaacacttcttgcaagggcagtggctcatcacact
gactgtacctttataagggtttctggctctgagttagttcagaagtatattggtgaaggg
tctcgaatggttagagaactgtttgttatggcaagggagcatgctccatcaatcatcttc
atggatgaaattgacagtattggatctgctcgaatggaatctggaactggaaatggtgat
agtgaagtgcagcgaactatgttggagcttctcaatcaactggatggatttgaagcctca
aacaagatcaaggttttgatggctacaaatcgcattgatattttggatcaagccctcctt
aggcctggacgaattgacaggaagattgagttcccaaatcccaacgaagagtcccgcttt
gatattttgaaaatccattcaagaaaaatgaacttaatgcgcgggattgatctgaagaag
atagcagagaagatgaatggtgcatctgtgcagagcttaagaaccaaaaagatgtgggac
atgttagcaatctttgggcttcagtgggaatttccagaatctgtgaaagagctcctcctg
ggttggaaggcccacactgaattaaccaatggcttggttccgttctcagatacactggac
aaagttgcatcggtatgcacagaagctggaatgtttgctctaagggagaggagagtacat
gtgacacaagaagattttgagatggcagtggcaaaggtgatgaaaaagnagacagagaaa
aacatgtccttgcggaagctgtggaagtaa
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