Vitis riparia (riverbank grape): 117912796
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Entry
117912796 CDS
T07274
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vri01002
]
117912796
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117912796
Enzymes [BR:
vri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117912796
Peptidases and inhibitors [BR:
vri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117912796
Ubiquitin system [BR:
vri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117912796
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
117912796
NCBI-ProteinID:
XP_034683401
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All DBs
Position
4:9031613..9050701
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AA seq
940 aa
AA seq
DB search
MHVSGFSLDLNWFLQFIFTSFVVALGLLHLVKNTASKYFVVDANFEGGRGGGGGEGGGAG
AGDVSVPGGGRSDPSIMPGVSGTGDSCLVCGNLGTKKCSGCKAVRYCSQTCQATHWKSGH
KTKCKDFQLSGKANLADSTTHSGRKASGVGVNNSNGIALVPSSGTSKILKQSKEILFPYD
EFVEFFNWDKPGFPPCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHQKQCRRNDRCF
LCEFQVHVERASHSPHPFSPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDE
FGGEKAVHPSSQETTLIQHIFGGHLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEE
CLDQFTVTEWLHGENMYKCDGCNDYVKASKRLTVRHAPNILTIALKRFQSGRFGKLNKRV
TFPETLDLSPYMSKAVVGTDVYKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCK
VTRVELDDVLSQGAYMLLYSRVCVRSSCLKTTEPFEKENEQMVEVAREVEPCSKQPVECF
TKAEKSNHVERSRFLPSDSNACSKVSNCEELSFRTNYEIVRKDPEDVDMINPELCSPVSR
DTEVVNNGHSNPEEIAVLVDHTPRMVSGFASSSEISSTEVHYPKCKSVSSSDVEEGGRAK
STCVDEVMSLASSIENSVPTQNGACGRAETSHEVSAAPRSTVKETLDETKPVSSEGLAIS
FVDNLERNKWGKDLPSSSCCTDHGGGKLTGQNSSSDTKLKPLFSPGFLGKRPRNKSTKRD
GKASEECHEVATAGKVSSNCNGIAKPGFPHQRSGELNNEAQALSNYNNLPSSSFVGEQPQ
KSLNEDEMVSIEFSESVIPCEEDGNFVTANESSNNITMGGAEESKGRNKDCSINSGSICS
LGNPLAEKLLAIDGEVHERGAITHSGLMGTKSKDLAERGL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtatccggattctctttggatctcaattggtttctgcaattcatattcacatcc
ttcgtcgtcgctttaggactgctccatttggtgaagaacacggcgtcgaagtacttcgtc
gtcgacgccaatttcgaaggaggacgaggaggaggaggaggagaaggaggaggtgctggg
gctggtgacgtctcggtgcccggcggtggccggagtgatcccagcatcatgcccggcgtc
tccggaaccggcgattcctgcctcgtgtgcggaaatttgggcaccaagaagtgttctggg
tgcaaggccgttcggtattgctcacaaacatgccaagccactcactggaaatctgggcac
aagacgaaatgcaaggattttcagttatcaggcaaggcaaatttggctgactccactact
cactctggaagaaaagcttctggtgttggggttaataattctaatggaattgcccttgtt
cctagtagtggaacctctaagattcttaaacagtcgaaagagattcttttcccctatgat
gagtttgttgaatttttcaactgggacaagcctggattccctccttgtgggcttataaat
tgtggaaacagttgctttgccaatgtagttctgcaatgtcttgcatacactcggccactt
gttgcctacttgttggagaaaggccaccagaaacagtgtagacggaatgatcggtgtttt
ctttgtgaatttcaagtccatgttgaaagagcaagccacagtcctcatcccttttcacca
atcaatatcctatctaggttaccttctattggtggtaatctaggctatggaaaacaagag
gatgctcatgagtttatgaggtttgctatcgatacaatgcaatcagtttgccttgatgaa
tttggaggtgaaaaagcggttcatccaagctctcaagaaacgaccctcattcaacacata
tttggtggccacctccaatctcaggtcatatgtacaaaatgcagtaagatatcaaatcag
tatgagaatatgatggatttaactgttgaaattcacggtgatgctgcatctttggaggaa
tgcctagaccaattcactgtcacagagtggcttcatggagaaaatatgtacaaatgtgac
ggatgtaatgactacgtgaaggcatccaagcgtcttactgttcgacatgctccaaatatt
cttactattgctttaaaaagatttcagagcgggaggtttgggaaacttaacaagagagtc
actttccccgagactttagatcttagcccttacatgagcaaggcagttgttggtacagat
gtttacaagctatatgcagttgttgtgcatttggacatgctaaatgcatcattttttggc
cattatgtttgctacaccaaggattttggtggaaactggtacaggattgatgactgtaag
gttacaagggttgaattggacgatgtgctctcgcagggggcttatatgctcttatatagc
agggtttgtgttcgatcatcatgtttgaagaccacggaaccttttgaaaaagagaatgag
caaatggtggaagtggcccgagaagtggagccttgctcaaaacaaccagttgaatgcttc
actaaagcagaaaagagtaatcatgttgagagatccaggttcctgccttctgatagtaat
gcatgttcaaaggtttctaactgtgaagagttgtctttcagaactaactatgaaattgta
agaaaagatccagaggacgtggatatgattaatcctgagttatgctcaccagtttcaagg
gatactgaagttgtcaacaatggacattctaatcctgaagaaattgctgtgcttgttgac
catacccctagaatggtttcaggttttgcttcttcaagtgagatatcttcaactgaagtt
cattatccaaaatgcaaatcagtctctagttctgatgttgaagagggtggcagagccaag
agcacttgtgtggatgaggttatgtcattggcatcttctatcgagaactctgtccccact
caaaatggggcctgtggaagggctgaaacgtctcatgaagtttctgctgctcctagaagc
acagttaaagaaaccctggatgaaacaaaacctgttagttctgaaggtttggcaatttcc
tttgtggacaatctggaaaggaataaatggggaaaggatttaccatcttctagctgttgt
actgatcatggtgggggaaaattgacagggcagaactcttcctctgacacaaagctaaag
cctttattttctcctggttttcttgggaagcgaccccggaataaatccacgaagagagat
gggaaagcctcagaagaatgccatgaagttgctactgccggcaaggtgagcagcaactgt
aatggaattgccaaacctggttttcctcatcaaaggagtggtgagttaaacaatgaggca
caagctctttcaaactacaataatttaccctcttctagttttgttggggaacaaccccag
aagagtctgaatgaggatgagatggtcagcattgaatttagtgagtcagttattccttgt
gaggaagatggtaattttgttactgccaatgagagctctaataacattactatggggggt
gcagaagaaagcaaggggcgaaacaaagattgctccattaatagtggctctatctgttct
cttggtaatccattagctgagaaattgttggctattgatggggaagttcatgaaaggggt
gcaatcactcattctggattaatgggaacaaagtccaaagatctggctgaacgagggctg
taa
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