Vitis riparia (riverbank grape): 117912805
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Entry
117912805 CDS
T07274
Name
(RefSeq) PHD finger protein MALE STERILITY 1 isoform X1
KO
K26271
PHD finger protein MS1/MMD1
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vri03000
]
117912805
Transcription factors [BR:
vri03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117912805
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GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
Motif
Other DBs
NCBI-GeneID:
117912805
NCBI-ProteinID:
XP_034683419
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Position
1:6295505..6298606
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AA seq
645 aa
AA seq
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MSQLDLTGCKKRKRGDRVFRFKTFGEKGYPAEFKGSFRENVVALLEFGHLESNMSCGMLC
WSFQLELHRHPPAHILLFVVEEPIEASTHRHCNHCKYVGWGHHMICNRKYHFVVPSRETE
AVFGHDSNYEGPDSRKGERSIVGVEGHAMHGVIHSNGFGHLLCVNGLEMGSDLAGRHIMD
FWDRLCTSLRARKVSIYDISQKKGMDLRLLHGVAYSKPWFGRWGYGFGRGSFGVTQPMYQ
KAIDAIQGMPLCLLIHHLGSSNHDIPLIFSRYQTLSDHSLVTVGNLFHFMLELKSRLPKE
TCLDSYNPGISVETTCRWSPKRVEMAARVIVEALRRAEFRWVSRQEVRDAARAYIGDTGL
LDFVLKSLGNHIVGNYLVRRSLNPVTKVLEYCLEDISTVFPSDEGLVMNDSKLKARYKIT
RIQLMKDMFYLYKNILKEQKQTVATGIFSTIPVAARVILDTKYLIKEYCGGQPSEVKVGL
KLYCTVVSRNNDEDDDGTEKALPFECIIFKDNSTVHELKLEVERNFREIYWGLRSFCVES
IVNLNAKGSDLVFGLVEAGSELLFEGNDSKVGINNEGIYESGHNNCTVDCPCGAKDDDGE
RMISCDICEVWQHTRCAQIPNNEEIPHIFLCNQCEQEIILFPSLP
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagttggacctaactggctgcaagaaaaggaagagaggagacagggtttttaga
ttcaagacctttggagaaaaaggctaccccgctgagttcaaaggctccttccgtgaaaat
gtggtggccctccttgaatttgggcatttagagagtaacatgagttgtggaatgctatgc
tggtcgtttcagctcgagcttcatcgccaccctcctgcccatatcttgctgtttgtggtt
gaagagcccattgaagcatccacccaccgtcactgcaaccactgcaaatatgtcggctgg
gggcaccatatgatatgcaataggaagtatcactttgtggtgccttccagggaaacagag
gcagtgtttggccatgacagcaactatgaagggcctgattcgaggaagggtgagaggagc
atagtgggagttgaggggcatgcgatgcatggagtcattcactccaatggcttcggccat
ttgctgtgtgtgaatgggctagaaatgggctcagacttggctgggcgacacatcatggat
ttttgggaccgtttgtgcaccagtctgagggcaaggaaagtgagtatatatgacatttca
cagaagaaaggcatggatttgaggctactccatggagtagcttacagtaagccctggttt
ggtcgctggggatatggctttgggcgtggaagctttggtgttactcaaccaatgtaccag
aaggccatagatgctatacaaggcatgccattgtgcttactcatccatcatcttggcagt
tctaaccatgacattccactcatcttctcaaggtatcaaacattatcggatcattcactg
gtgacagttggcaatctctttcatttcatgttagagcttaaatcccgccttccaaaggaa
acttgtcttgattcatataatccaggaatctcagtggaaactacttgtagatggtctcca
aagcgagttgaaatggcagcaagggtgattgttgaagcattaaggagggctgaatttagg
tgggtctcaaggcaagaggttcgtgatgctgctcgggcctacattggtgacactggcttg
ctggattttgtgctgaaatccctgggaaaccacatagttgggaattacttggttcgacgc
agcttaaacccagtgacaaaagttctggagtattgcttagaagacatctccactgtattt
cccagtgatgaaggtttggtcatgaatgattcgaaactgaaggctcgctacaagatcacg
aggattcaactaatgaaagacatgttctacttgtacaaaaacatcctaaaagagcaaaag
cagacggttgccacagggatatttagtacaatacctgtagctgcacgggtaattcttgac
accaaatatctaatcaaagaatattgtggggggcaaccttcagaagtcaaagtgggcttg
aagctctattgtacagttgtatcacgaaacaatgatgaggatgatgatggaacagaaaag
gcacttccatttgagtgtatcatcttcaaagataattctaccgtccatgagctcaagcta
gaagttgaaaggaactttagagagatttattggggattgagaagcttctgtgtggagtca
atagtgaatttgaatgccaagggatcagatttggtttttgggctagttgaagcaggcagt
gaacttctctttgaaggtaatgacagcaaggttggaatcaacaatgaggggatatatgag
agtggtcataataactgcactgtggattgtccttgtggagctaaagatgatgatggtgaa
cgaatgatatcatgtgatatttgtgaagtttggcagcatacacggtgtgctcagattcca
aataatgaagaaattccacatatatttctctgcaatcagtgtgagcaagaaatcatacta
tttccttctctaccatag
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