Vitis riparia (riverbank grape): 117912848
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Entry
117912848 CDS
T07274
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
vri04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117912848
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117912848
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117912848
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117912848
03036 Chromosome and associated proteins [BR:
vri03036
]
117912848
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117912848
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117912848
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117912848
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ComGF
Motif
Other DBs
NCBI-GeneID:
117912848
NCBI-ProteinID:
XP_034683489
LinkDB
All DBs
Position
4:complement(882272..891172)
Genome browser
AA seq
514 aa
AA seq
DB search
MNGIGGEEVTARAGPARPLEWKFAQVFGERAFGEEVQEVDIISAIEFDKTGDHLATGDRG
GRVVLFNRTDTRDHGGNRRDLETADYSPSRHPEFHYKTEFQSHEPEFDYLKSLEIEEKIN
KIRWCQTANSALFLLSTNDKTIKFWKVQEKKVKKVCDMNVDPSKALGNGIVCSSISTSSK
PCIANGGCVNRTFNYLSTDFSFPPGGIPFLHLPRVMSHETSSVARCRRIYAHAHDYHINS
ISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFHPSHCNML
AYSSSKGSIRLIDLRQSALCDTHCKLFEELEAPTSRSFFTEIIASISDIKFSKDGRHLLS
RDYMTLKLWDINMESVPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSY
SNLFRVFGCSEGSTEATTLEANKNPMMRQVQTPSRPSRSLGSLSRVGRRGTDSSGADTNG
NAFDFMTKLLHLAWHPTENSLACATSNSLYMYYA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcatcggcggagaggaggtcacggctcgggcggggccggctcggccgctggag
tggaaatttgcgcaggtgtttggggagcgggcgtttggggaggaagttcaggaagttgat
atcatatcagctattgagtttgataaaactggggaccatcttgctactggagatcgtggg
ggtcgggtggttttatttaacagaactgatacgagggatcatggtgggaatcgaagagat
ttagagacggcggattattcaccaagcaggcatcctgagttccactataaaactgagttt
cagagccatgaaccagagtttgactatctcaagagcttggaaattgaggagaaaatcaac
aagattagatggtgtcagacagctaacagcgcactgtttcttctctccactaatgataaa
accatcaaattctggaaggtccaagagaagaaggtcaagaaagtatgtgacatgaatgtt
gacccttcaaaagctttgggaaatggtattgtttgttcaagtatatcaacaagctccaaa
ccatgtattgcaaatggaggatgtgtcaacagaaccttcaattatttgagcactgacttt
tcatttccacctgggggaataccattcctacatttgcccagggtgatgagtcatgagaca
agctcagtggccaggtgtcggagaatttatgctcatgcccatgactatcatatcaattcc
atttcaaataacagtgatggtgaaacttttatatcagctgatgatctccggataaatctc
tggaacttggaaattagcagtcaaagtttcaacattgttgatgtgaagcctgcaaacatg
gaggatctaactgaggttataacttcagcagaatttcatccttcccactgcaatatgtta
gcatatagtagctcaaaaggctcaatccgtcttattgatttgcggcaatcagctttatgt
gatacacattgcaaattgtttgaggaactggaggcacctacttcaagatctttttttaca
gagataattgcctcaatttctgatataaagttttcaaaggatggaagacatttacttagt
cgtgattatatgacacttaagttgtgggacataaatatggagtctgtgccagtcgcaact
ttccaagttcatgagcatttaagacctaagctgtgtgatttatatgaaaatgattctatc
ttcgacaaatttgagtgttgtctgagtggagatggactacgagtggcgactggttcctac
agtaatctatttcgtgtatttggttgttctgaaggcagcacagaagccacaactttggaa
gccaataaaaatcccatgatgaggcaagtccagaccccctcaaggccttctagatccctg
ggctctctatctcgtgttggcaggcgaggaacggatagttctggagccgacacaaatgga
aacgcttttgatttcatgacaaagttgctccatttagcctggcatccaactgaaaactcc
ctagcttgcgccacttcaaacagcctgtacatgtactatgcataa
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