Vitis riparia (riverbank grape): 117912897
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Entry
117912897 CDS
T07274
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG3 isoform X1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117912897
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117912897
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117912897
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
vWA-TerF-like
Prok-RING_4
zf-RING_2
zf-RING_UBOX
zf-RING_5
Sina_RING
Rcat_RNF216
gp32
IBR_1
Motif
Other DBs
NCBI-GeneID:
117912897
NCBI-ProteinID:
XP_034683577
LinkDB
All DBs
Position
4:24064095..24093796
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AA seq
390 aa
AA seq
DB search
MGNSESAFDDSHHDFLHQTPSYAGTSMDPDYRHRRQLPYIADNFNSLDQVTDALRESGLE
SSNLILGIDFTKSNEWTGRHSFHRKSLHAIGNTPNPYEQAISIIGRTLSPFDEDNLIPCF
GFGDASTHDKYVFSFYPDHRYCRGFEEVLARYKEIVPYLKLSGPTSFAPIIDAAIDIVEG
SNRQYHVLVIIADGQVSGSLDGSSGRFSPQEQATVNSIVAASRYPLSIILVGVGDGPWDA
MKLFDDNIPQRSFDNFQFVNFSKIMSENMEASKKETAFALSALMEIPFQYRATLRLQPID
NNLVGGPRTRLLPPPKEVLDHDREALQHMMATTPSVEKTAPEDQVCPICLTNPKNMAFGC
GHLTCKECGESISLCPLCREPINTRLKLYS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggggaattcagaatcagcatttgatgattctcatcatgattttctgcatcaaacccct
tcttatgcaggaacttcaatggatcctgactatcgacataggcggcaattgccttacata
gccgataatttcaactctttggatcaggttactgatgcattgagagaatctggccttgaa
tcatcaaacttaattcttggtatcgacttcacaaaaagcaatgagtggacaggcaggcat
tcattccataggaaaagccttcatgcaattggtaacacacctaacccatatgaacaagca
atctctataattggccgaactctgtctccttttgatgaagacaacttaataccttgcttc
ggatttggtgatgcatcaacacacgataagtatgttttcagcttttaccctgatcaccga
tattgtcgtggtttcgaggaggttctggcacgatataaagagattgttccgtacttgaag
ttgtcaggtccaacttcctttgccccgataatcgatgcagctattgacattgtggaggga
agcaacaggcaatatcatgttcttgtcattattgcagatgggcaggtttccggaagtctt
gatggatcatctggaaggtttagtccacaagaacaagcaactgtaaattctatagttgcg
gctagccgatatcctctctcgattattttggtcggtgtgggagatggaccgtgggatgca
atgaaattatttgatgataacattcctcaacgctcatttgacaacttccagtttgtcaac
ttctcaaagatcatgtctgagaacatggaagcatcaaagaaggaaacagcctttgcactt
tcggccctaatggaaatcccatttcagtacagagccaccctgaggctgcagccaatcgat
aataatttagtgggtggtccacgtacaaggctgcttccacctccaaaagaagtgttggat
catgatagggaggcattgcagcacatgatggccaccaccccatccgtggagaaaacagcc
ccagaggaccaggtctgccccatatgcttgacaaatccgaagaatatggcttttggatgc
ggtcatttgacttgcaaggagtgtggtgagtcgatatcactgtgcccattgtgccgggag
cccataaacactcgtctcaagctgtactcataa
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