Vitis riparia (riverbank grape): 117912933
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Entry
117912933 CDS
T07274
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117912933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117912933
03029 Mitochondrial biogenesis [BR:
vri03029
]
117912933
Membrane trafficking [BR:
vri04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117912933
Atg1 complex
117912933
Mitochondrial biogenesis [BR:
vri03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117912933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
117912933
NCBI-ProteinID:
XP_034683636
LinkDB
All DBs
Position
4:22532564..22539968
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AA seq
660 aa
AA seq
DB search
MASLGNMNSEPPEIEQIVTEFFAKSLHIILESRSPYVSSRNYSGDPTISPSSSSSSSSSV
RPRDKWFRLALRDCPAALENIDFWRQSNLEPMVVDVILVQRPHDWDPINCIPRRDLVRNT
SLKEQSRNSWGSEQEEFGCVAKSEKIIERWVVQYESRKNSSLGSKRSSNSNSHNLLKIQH
TLYKKSIILLRSLYLTVRLLPAYKLYHDLNSSQIHAFTLAHRVSSIIEPFTGREEVEMQR
FCFTPVDTCCGRLCLSVLYRASLSDVSSEPSTPMSPQVIADYVGSPMADPLKRFPSLPTT
CSPSSAPFSRRHSWSYDLYRASPPSVSFSPSPTHSESRASVSNPASRRLPPMSLPPHPPE
MSAAHHKNTGFDEYWPSPTISPPSSASPPTNTLGSHLPKSLLRSESAPVSIPATKPVNTP
ALPYKHNLPPSPPLKGTGCSNSKTDRRTCQIRTGTTVDKSSIGKDETGKISGLKISSGSS
QPVSVSRSSSRLSLPDDFDGSEFSCPFITDDDDVTDSYRRPESYDHKRYRHEPVEPGGVL
RVPKSQGAEVGALVLMLKTAAPLCQDLSSSTNFSQAPRSETWNNSVQPPDQISEAPAVQD
ATSSRVASSGLVFSKTTADALEELKVYKDMKNGLIKQGLRSQTSTNLASAAEVSSRGMTG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctcggaaacatgaactcagaaccaccagaaatcgaacaaatagtcacagaa
ttctttgcgaaaagtctccacataatactggagtcgaggtctccttatgtgtcctcaagg
aattacagtggagacccaactatatctccttcttcttcatcctcctcctcctcgagtgtg
aggccacgagataagtggtttagattagcattgcgggactgcccagcggcactagagaat
attgatttctggcgccaaagcaatcttgaaccaatggtggtggatgtgattttggttcag
cgaccacatgactgggacccaataaattgtattccaaggagggatcttgttaggaatact
tcattgaaggagcagtctcgaaattcttggggttctgagcaggaagagtttgggtgtgtg
gcaaagagtgaaaagatcatagagagatgggtagtgcaatatgagagtcgaaagaatagt
agtttggggagtaagagatcgagtaattcaaattcacacaatttacttaagatacagcac
acattatataagaaatcgataatactattgaggtctttgtatttaacggttaggctttta
cctgcatacaaactataccatgatctcaattcctctcaaattcatgcatttactcttgct
catcgggtgtcttctattatcgagcctttcactggtagagaagaagtagaaatgcagcga
ttttgcttcacccctgtggacacttgttgtggtaggctctgtctttctgtattgtatcgt
gcctcactctcggatgtgagttctgaaccatcgacccccatgtccccacaagttatagct
gattatgttggaagtccaatggcggatccccttaagagatttccatcccttcccacgaca
tgttctccatcttcggcaccattctcaaggcggcatagttggagctatgacctttataga
gcttcgcctccttcagtttctttctcaccttctcctacacattcagagtctcgtgcttca
gtttctaaccctgcttcccggcgtctcccgcctatgagcttgcctcctcatccgcctgaa
atgtctgcagctcaccacaagaatacaggttttgacgagtattggccttccccaacaatt
tctcccccctcctctgcatcgccaccaacaaatactctgggtagtcatctgccaaaatca
cttttacgttctgaaagtgctcctgttagcatacctgcaaccaagcctgttaatactcct
gctttgccctacaaacataatttgcctccctctcctcctcttaaaggtactggttgcagt
aattctaagactgatagaaggacatgtcaaattcgaactggtacaacagttgataagagc
tctattgggaaagatgaaactggaaaaatttctgggttgaagatatcatctggtagctca
caaccggtttcggtttcccgaagctccagtaggttgtctctcccagatgattttgatggt
tctgaattttcctgcccatttatcacggatgacgatgatgtgacagactcataccgtaga
cctgagtcttatgatcataaaagatatagacatgagcctgttgagccagggggagtattg
cgagtcccaaagtcccaaggtgctgaagttggtgctctcgtactgatgttgaagacagct
gctcctctttgccaagacttgtccagttccacaaatttttcacaagcccccaggtctgaa
acatggaacaacagcgtccaaccacccgaccagatatctgaggcaccagcagttcaggat
gctacttcttcaagggtagcgtcttctgggcttgttttctcaaagacaacagctgatgca
ctagaggagctcaaagtttacaaggatatgaaaaatgggttgatcaagcaaggtcttagg
tcccagacatcgactaatttggcttcagctgcagaagtttccagcagaggtatgaccgga
tga
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