Vitis riparia (riverbank grape): 117913046
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Entry
117913046 CDS
T07274
Name
(RefSeq) protein PELOTA 1 isoform X1
KO
K06965
protein pelota
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117913046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117913046
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117913046
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
117913046
NCBI-ProteinID:
XP_034683812
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Position
4:16515857..16537311
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AA seq
378 aa
AA seq
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MKIVRRDLVANGPGSVKMVPVDSDDLWYAYNLIAPGDTVLAVTVRKVLREVASGGRDAER
VKLKLEIKVEVADYDKVGSVLRIRGKNILENEYVKIGQFHTLEIEQHRPFVLRKVVWDSF
ALDTLNQASDPAASADLAVVLMQEGLAHVILVGRSLTITRSRIEASIPRKHGPAIAGYEA
ALNKFFENVLQAFLKYVDFNVVRCAVIASPGFTKDQFHRHLLLEAERRQLRSIIENKSRI
ILVHTSSGYKHSLKEVLDAPNVMNMIKDTKAAQEVQALKDFFNMLSNDPARACYGPKHVE
VAHERMAVQTLLITDDLFRSADIPTRQKYVNFVNSVKDSGGTAHIFSSMHVSGEQLAQLT
GIAAILRFPLPDLEDIEM
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtcaggagagacttagtcgccaacggccccggcagcgttaagatggtgccg
gtcgattctgatgatctttggtatgcttataacctaattgctccaggagacacagttttg
gctgttactgttaggaaagtcctaagagaggtggcttcgggaggaagggatgcagaacgt
gtgaagctaaagctggaaataaaagttgaggttgctgactatgacaaagtagggtctgtt
ttgcgtatacggggaaagaatatcctagagaatgaatatgtaaagatagggcaattccat
actttagaaattgagcagcatcgcccttttgtgttaaggaaggtggtttgggactcgttt
gctttagatacactcaatcaggcctctgatcctgctgcaagtgctgatttagcagtggtt
ttgatgcaagaaggattagcacatgttatcctcgttggtagaagccttacaattactcgc
tcccggatagaagcttcaattcctcgcaaacatgggcctgctattgctggttatgaggca
gctttgaataagtttttcgagaatgttttacaggctttcctgaaatatgtggacttcaat
gttgttcgctgtgctgtcattgcaagtccaggtttcaccaaggatcaatttcatcgtcat
ttattgttggaggcagaacgaagacagctgagatctattattgagaataagtcacgcata
attcttgtgcatacgtcctctggatacaagcatagtttaaaagaggttttggatgcacca
aatgtgatgaacatgataaaggatacaaaagcagcacaagaggtccaagctctcaaagat
tttttcaacatgctttcaaatgatccagctcgggcatgctatggaccaaagcacgttgag
gttgcccatgaaagaatggctgtgcagacgcttcttataactgatgatctcttcaggagt
gctgatattccaacaaggcaaaaatatgtgaattttgtcaattcagtcaaggattcaggg
ggtactgctcatatattctcatccatgcatgtgtcaggagaacagctggcacagctgact
ggaattgcagcaattctccggttccctctgccagacctggaagacatcgagatgtga
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