Vitis riparia (riverbank grape): 117913061
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Entry
117913061 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00906
Carotenoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117913061
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vri01006
]
117913061
Enzymes [BR:
vri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
117913061
Prenyltransferases [BR:
vri01006
]
Terpene biosynthesis
Squalene/phytoene synthase
117913061
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
117913061
NCBI-ProteinID:
XP_034683847
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All DBs
Position
4:11783971..11788914
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AA seq
438 aa
AA seq
DB search
MSVALLWILPPNKEASSSFGFLESIRDGNRSLDSPWFIPRDQNLIFNDRPRKGRRQRCNS
SSSGADLRYSYLGGSGMESRTNFPIFSSMVVNPTGEMAVSSEQKVYDVVLKQAALVKKQL
RSSGELDVKPDIILPGTQSLLSEAYDRCGEVCAEYAKTFYLGTMLMTPERRRAIWAIYVW
CRRTDELVDGPNASHITPTALXIGGSQGWKIFFXGRPFDMLDAALSDTVAKFPVDIQPFK
DMIEGMRMDLRKSRYRNFDELYLYCYYVAGTVGLMSVPVMGIAPESQATTESVYKAALAL
GIANQLTNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFMGRVTDKWRSFMKDQIKRAR
MFFDEAEKGITELSSASRWPVWASFLLYRQILDEIEANDYNNFTRRAYVSKAKKIVALPL
AYARSLVRPSRTTSLAKA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgctctgttgtggattcttccccccaacaaagaggcctccagttcctttggc
tttttggaatcaatccgagatggaaaccggtctttagattcaccatggttcattcctaga
gatcagaatttgatatttaatgacagacccaggaaaggtaggaggcagaggtgcaattct
agctcatctggggcagatttgaggtattcatacttgggtggatcaggcatggagagtaga
accaattttcctatattttcaagtatggtagtgaacccaactggagaaatggcagtgtcg
tcggagcagaaggtttatgatgtggtgctgaagcaggcagcccttgttaagaagcaattg
agatcgagtggagaacttgatgtgaaacctgatattattcttcctgggactcagagcttg
ttgagtgaagcctatgatcgatgtggtgaagtttgtgcagagtatgccaagacattttac
ttgggaacaatgctgatgacacctgagagacgaagagctatctgggcaatatatgtgtgg
tgtcggagaacagatgagcttgttgatgggcctaatgcatcacacataaccccaacagcc
ttgnngataggtgggagtcaaggttggaagatctttttcnagggccgcccttttgatatg
cttgatgctgctttatcagatacagttgccaagtttcctgttgacattcagccattcaaa
gatatgattgaaggtatgaggatggaccttagaaagtcaagatacagaaatttcgatgag
ctatatctgtactgttattatgtggcgggaactgttgggttaatgagcgttccagttatg
ggcattgcacctgaatcacaggcaaccacagagagtgtctataaggcagccttggcatta
gggatcgcaaatcagctgactaacatactcagggatgttggagaagatgcaaggagagga
aggatttatttaccacaggatgagctggcacaagcagggctctcagatgaggacattttt
atgggaagggtaacagataaatggagaagcttcatgaaagatcaaattaagagagcaagg
atgttcttcgatgaggcggaaaaaggaattacggagctcagctcagctagtagatggccg
gtatgggcatcttttctgttgtatcggcaaatactggatgagattgaagctaacgattac
aacaacttcactaggagagcttatgtgagcaaagctaagaagatagttgctttgccacta
gcgtatgcaaggtcccttgtgaggccatcaagaacaacatctttagccaaggcatga
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