Vitis riparia (riverbank grape): 117913169
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Entry
117913169 CDS
T07274
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117913169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117913169
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117913169
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
117913169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
Prok-RING_4
U-box
Motif
Other DBs
NCBI-GeneID:
117913169
NCBI-ProteinID:
XP_034684006
LinkDB
All DBs
Position
4:complement(1525965..1532063)
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AA seq
400 aa
AA seq
DB search
MGLGRPETSGSVDPRDTTGEVGRTTAAEPSGSRRFPLAAQPEIMRAAEKDDQYASHVYEA
CRDAFRHLFGTRVAVAYQSETKLLGQMLYYILTTGSGQQTLGEEYCDITQVAGPYGLSPT
PARRALFILYQTSVPYIAERVSSRVAARGIAIADAQADELYGNNVPGSSQAQSSAITEIP
SSSASGASLSVLSRLKERFNRSWLYAVQRWPVVLPLAREFLQLVLRTNLMFFYFEGLYYH
ISKRAAGIRYVFIGKSLNQRPRYQILGVFLLIQLCIIAAEGLRRRNLSSIASSVHRTPLG
AHQTATGQGLPVLNEEGNLIAANADKGSWVSDSTYVESQASGVSKCTLCLSNRQHPTATP
CGHVFCWSCIMEWCNEKPECPLCRTPLTHSSLVCLYHSDF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggggttgggacggcccgagacatccggttcggtcgacccaagagacacaaccggagaa
gtgggccggaccacagccgcagaaccgtccggttcacggcgattcccgctggcggctcag
ccggagataatgagagctgccgagaaggatgaccagtacgcctcccacgtctacgaagcc
tgtcgcgacgcttttcgccatctctttgggacaagagttgctgtagcttaccagagcgag
acaaaacttttggggcagatgctttattatatcttaacaacaggttcagggcagcagaca
ctgggtgaagaatattgtgacatcactcaggttgcgggaccttatggactttcgccaaca
ccagccaggcgtgctcttttcattttataccagacttcagttccttatattgcagaaaga
gtcagctctagagttgcggcccgtggcatagccattgctgatgcacaggctgatgagctt
tatggaaacaatgttcctgggagcagtcaagctcagtcttctgcaattactgaaattcca
tcttcttcggcatcaggggcatctctttcagttctttcaaggttgaaggagagattcaat
cgatcatggttgtatgcagttcagaggtggcctgtggtacttcccttagctcgcgagttc
ttgcaattggttcttcgtactaatctaatgttcttctactttgaaggcttatattatcat
atctcgaaacgtgcagcaggcattcgttacgtcttcatcggaaaatcattgaatcaaagg
cctagatatcaaatattgggagtattccttttaattcagctatgtatcattgccgctgaa
ggattacggcgcaggaatttatcttctattgcaagttcagttcatcgtactcccttaggg
gctcaccaaactgcaacagggcaaggtttgcctgttttaaatgaagaaggcaatttgata
gcagccaatgctgataagggaagttgggtctctgattccacatatgtagagtctcaagca
agtggggtcagcaaatgcacgctctgcctgagtaatcgccaacacccaacagccacacct
tgtggtcatgtattctgttggagctgcattatggaatggtgcaatgaaaagcctgaatgt
ccactctgccgcacacccttgactcattcaagcctagtttgtttatatcattcagacttc
tag
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integrated database retrieval system
