KEGG   Vitis riparia (riverbank grape): 117913169
Entry
117913169         CDS       T07274                                 
Name
(RefSeq) peroxisome biogenesis factor 10
  KO
K13346  peroxin-10
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    117913169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vri04121]
    117913169
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    117913169
SSDB
Motif
Pfam: Pex2_Pex12 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-C3HC4_4 zf-RING_5 Prok-RING_4 U-box zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 117913169
NCBI-ProteinID: XP_034684006
LinkDB
Position
4:complement(1525965..1532063)
AA seq 400 aa
MGLGRPETSGSVDPRDTTGEVGRTTAAEPSGSRRFPLAAQPEIMRAAEKDDQYASHVYEA
CRDAFRHLFGTRVAVAYQSETKLLGQMLYYILTTGSGQQTLGEEYCDITQVAGPYGLSPT
PARRALFILYQTSVPYIAERVSSRVAARGIAIADAQADELYGNNVPGSSQAQSSAITEIP
SSSASGASLSVLSRLKERFNRSWLYAVQRWPVVLPLAREFLQLVLRTNLMFFYFEGLYYH
ISKRAAGIRYVFIGKSLNQRPRYQILGVFLLIQLCIIAAEGLRRRNLSSIASSVHRTPLG
AHQTATGQGLPVLNEEGNLIAANADKGSWVSDSTYVESQASGVSKCTLCLSNRQHPTATP
CGHVFCWSCIMEWCNEKPECPLCRTPLTHSSLVCLYHSDF
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggggttgggacggcccgagacatccggttcggtcgacccaagagacacaaccggagaa
gtgggccggaccacagccgcagaaccgtccggttcacggcgattcccgctggcggctcag
ccggagataatgagagctgccgagaaggatgaccagtacgcctcccacgtctacgaagcc
tgtcgcgacgcttttcgccatctctttgggacaagagttgctgtagcttaccagagcgag
acaaaacttttggggcagatgctttattatatcttaacaacaggttcagggcagcagaca
ctgggtgaagaatattgtgacatcactcaggttgcgggaccttatggactttcgccaaca
ccagccaggcgtgctcttttcattttataccagacttcagttccttatattgcagaaaga
gtcagctctagagttgcggcccgtggcatagccattgctgatgcacaggctgatgagctt
tatggaaacaatgttcctgggagcagtcaagctcagtcttctgcaattactgaaattcca
tcttcttcggcatcaggggcatctctttcagttctttcaaggttgaaggagagattcaat
cgatcatggttgtatgcagttcagaggtggcctgtggtacttcccttagctcgcgagttc
ttgcaattggttcttcgtactaatctaatgttcttctactttgaaggcttatattatcat
atctcgaaacgtgcagcaggcattcgttacgtcttcatcggaaaatcattgaatcaaagg
cctagatatcaaatattgggagtattccttttaattcagctatgtatcattgccgctgaa
ggattacggcgcaggaatttatcttctattgcaagttcagttcatcgtactcccttaggg
gctcaccaaactgcaacagggcaaggtttgcctgttttaaatgaagaaggcaatttgata
gcagccaatgctgataagggaagttgggtctctgattccacatatgtagagtctcaagca
agtggggtcagcaaatgcacgctctgcctgagtaatcgccaacacccaacagccacacct
tgtggtcatgtattctgttggagctgcattatggaatggtgcaatgaaaagcctgaatgt
ccactctgccgcacacccttgactcattcaagcctagtttgtttatatcattcagacttc
tag

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