Vitis riparia (riverbank grape): 117913170
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Entry
117913170 CDS
T07274
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117913170
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117913170
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117913170
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
117913170
NCBI-ProteinID:
XP_034684007
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Position
4:20611966..20619076
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AA seq
630 aa
AA seq
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MKIVTYNVNGLRPRISQFGSLLKFLGSLDADIICVQETKLSRHELTADVVMADGYESFFS
CTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVK
AEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERIQFKHTFFQILQKR
WETLQQQGRRIFVVGDLNIAPAAIDRCDAGSDFEKNEFRRWFRSMLVECGGPFFDVFRAK
HPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDHIFVTCHVKECDILTQ
FKRWKPGNKPSFSNNRWKGGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVPTVH
GFQQTIASVLMKRQKAEQVKTFEVSSSFSDENITTRSCSEILKRSSQDCCISDLPSGDFL
SSSNLQSEGVIPRLDGPSICSISDSSNRIMTASIIRQTKSTPGTVTKKKARQSQCSQLSV
KSFFQKSSNVKDGVDNAAADASLDQADESKSNQNPNKTSMGDDESKSSKMVELDVSASNQ
EQDVVISGSSPQRDKNDIALVEWQRIQQLMQNSIPLCKGHGEPCVSRVAKKPGPNHGRRF
YVCARAEGPASNPETNCGYFKWAASKSRHR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgacttataacgtgaatggcctaaggccacgcatctctcagttcggttct
ctcctcaaatttctcggttccctcgacgccgacatcatatgcgttcaggagacgaagcta
tcgaggcatgaactgacggcagatgtggtgatggcggatggatacgaatccttcttttct
tgcacccgcacgaacagcaaaggtcgggtgggctactccggtgttgcaacattttgccgt
gtgaagtcagcattttcgagcactgaagtggcgttgccaattgcagcagaagaaggcttc
accggcctccttgaaaagtctggagggtttggaactggaaaggatgaaatccctgtaaaa
gcagaaggtcttgaagagtttgccaaagatgagcttctcaaggttgacagtgagggccgt
tgcattatcacggatcatggtcattttgttcttttcaatatatatgggccccgagctgac
tctgaggatacagaaaggattcagtttaagcacacttttttccagatattacagaaaaga
tgggagactctccagcagcaggggaggaggatatttgttgttggtgatcttaatattgct
cctgctgctatagatcgctgtgatgctggatcagattttgagaagaatgagttcaggaga
tggtttagatctatgctagtggaatgtggaggccctttctttgatgtttttagagcaaaa
catcctgacagaagagaagcatacacatgctggtcatcgagcacaggtgcagaggaattc
aattatgggtcaagaattgaccatattctcagttctgggtcatgcttacatcaagaccat
tgcctgcaagatcatatctttgttacttgccatgttaaagaatgtgacatattgactcag
tttaagcgatggaagcctggaaacaaacccagtttctccaataacaggtggaaaggaggg
agaagcatcaaactagaaggttctgatcatgctcctgtttttatgagtttaatggatatc
cctgatgttgcgcagcatagtactccatctttgtctgctagatatgttcctacggttcat
gggttccagcaaactattgcatcagtattaatgaaaagacaaaaggctgagcaagtaaag
accttcgaggtatcaagttcattttcagatgaaaatattacaactagaagttgcagtgag
attctgaaaagatcatcccaagactgctgtatatctgacctgccttcaggcgactttctg
tcttcttcaaatctgcaatcagaaggtgtcattccaagactggatgggccctccatatgt
tccattagtgattcttccaatagaattatgaccgcctcaataatcaggcaaactaaatca
acgcctggcacagtaacaaagaaaaaagcaagacaaagtcaatgctcccaactctctgtg
aaatcatttttccagaaaagttccaacgttaaagatggtgttgataacgctgcagctgat
gcgtcacttgatcaggcagatgagtcaaagtctaatcagaaccccaacaagacttctatg
ggtgatgatgaaagcaagagttcaaagatggtggagttggatgttagtgcatccaatcag
gaacaagatgtggtaatttccggcagttccccgcaaagggataaaaatgatatagcttta
gtggagtggcaaaggattcaacaactcatgcagaacagcatacctctttgtaagggccat
ggtgaaccctgtgtttctcgggtagcaaagaaacctggtccaaatcatggacgcaggttt
tatgtctgtgctcgggctgagggaccagcatctaatcctgaaacaaattgtggttacttc
aagtgggctgcttcaaaatctaggcacagatga
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