Vitis riparia (riverbank grape): 117913198
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Entry
117913198 CDS
T07274
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117913198
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117913198
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117913198
03036 Chromosome and associated proteins [BR:
vri03036
]
117913198
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117913198
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117913198
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117913198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
nec1
Motif
Other DBs
NCBI-GeneID:
117913198
NCBI-ProteinID:
XP_034684052
LinkDB
All DBs
Position
4:complement(3922893..3927064)
Genome browser
AA seq
492 aa
AA seq
DB search
MLKQILSRLPRKALKAESGDLVRTDTGTPRSSSGSPGSRPTSAKKTSSVFPTNAVAGAEP
SAAFNDVPIAEKLNLFVSKLNLCCTVFDFNDPSKNSIEKDVKRQTLIELVDFMVSGPPRF
TEPVIAAMCKMCATNLFRVFPPNYRSNSLGGENDDDEPTFNPAWSHLQLVYDLLLKFVTS
SCLDAKVAKKYIDHSFILRLLDLFDTEDPRERECLKTVLHRIYGKFMVHRPFIRKSMSNI
FYRFVFETERNNGIAEMLEIFGSVISGFALPLKEEHKIFLWRALIPLHKPKSVGVYFQQL
SYCVTQFIEKEPKLASSVIKGLLRYWPITNSQKEVMFLGELEEILEAINMVEFQKIMVPL
FWRIGCCINSFHFQVAERALFLWNNDQIVNLIAHNRQVLIPVIFPALERNAQSHWNQAVL
NLSLNVRKMLSEMDDELFLACHARFKEEESRLSLEAQKRKEKWEQLENEASLQPVSGNTA
VLVTPLATSITC
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcaaattctcagtaggttgccacggaaggcattgaaagccgaatccggtgac
ttggtgcgaaccgacaccggtacgccacggtcgagcagtgggagcccggggtctcgacca
accagtgcaaagaagacatcttcggtttttccgacaaatgctgtagctggagctgagccc
tcagcggcattcaacgatgtgccaattgcagagaaattgaatctttttgtgagtaaattg
aatctttgctgcacagttttcgatttcaatgacccaagtaagaattctatagagaaggac
gtcaaacgtcaaacgttgatagaacttgttgattttatggtttcggggcctcctaggttt
acggaacctgtgattgccgcaatgtgtaaaatgtgtgctactaacctttttagggttttc
ccccctaattatcgatctaattctcttggtggtgagaatgatgatgacgaaccaacattc
aatccagcgtggtcgcatttacaacttgtgtatgatttattgcttaaatttgttacttca
tcgtgtctggatgcgaaggtagccaaaaagtatatagaccattcatttatcttgaggttg
cttgacctgtttgataccgaggacccaagagaaagagaatgtttgaaaactgttctgcat
aggatttatggcaagttcatggttcacaggccttttatcaggaagtccatgagcaatata
ttctatcgttttgtgtttgagacagaacgaaataatggtattgctgagatgctggagatt
tttgggagtgtaattagtgggtttgcattacctctgaaggaggagcacaagatcttcctg
tggagagctttgattcctctgcacaagccaaaatctgtgggagtttattttcagcaattg
tcctactgtgttacacaatttatagagaaggagccaaagttagccagcagcgtgataaag
ggtttgttgagatactggccaataacaaatagccagaaggaagtaatgtttctgggtgag
ttagaagagatactagaagcaattaacatggtggaattccaaaagatcatggttccatta
ttctggcggattggatgctgcatcaacagtttccattttcaggtggccgaaagggccctt
ttcttatggaacaatgatcagattgtaaacctgattgcacataaccgacaagttctcatt
ccagttatattcccggctttagaaagaaatgcccaaagccattggaatcaagcagtgctc
aacttatctctaaatgtgagaaagatgttatcagagatggatgatgaactattcttagcc
tgccatgcccggtttaaggaggaagaaagcaggctaagcctggaagcacaaaagcggaag
gagaaatgggaacaactagagaatgaagccagccttcagccagtgagtggaaacactgct
gttctagtaactcctttagcaacctcgattacttgttaa
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