Vitis riparia (riverbank grape): 117913245
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Entry
117913245 CDS
T07274
Name
(RefSeq) importin-5-like
KO
K20222
importin-5
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117913245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vri03009
]
117913245
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117913245
Pre-60S particles
117913245
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
HEAT_EZ
Importin_rep_4
TPR_TNPO3_IPO13_3rd
TOR1L1_N
Arm
MMS19_C
IFRD
Tti2
TPR_26
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
117913245
NCBI-ProteinID:
XP_034684095
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Position
4:13298683..13302514
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AA seq
611 aa
AA seq
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MDAEEPGIRDKALELLGSDPQALQTNILNLTSPDHSLHSNARTLLAYLGRHYTNSLCFRV
SCLILSTSDASIRETIVNFLRLLLTASGSHFWMILSIIHRNDIKRVFLECLEKETSTRVA
KILCKLALDVAVESEWPELVPFMLRCFEASDIRVQETSLFLFGLLSETLGEKLSCEPDKL
QSLFLKCLGCENWRVRAAAVGASVRLIVFLMGTSSNDLLEQLSAPIMDTFDDAMENGKER
YARKVVKHLTVLMRKKPGFLRSRIDTCIAYMLIMAENKVWSEKSRHLAVKFLITLAEERH
QGFAMLKMLPDKITRILSLLFKMVADIKDVNSWYEAESHHKNSGETNNCCYGKESLRRFA
IAKHVDITDEKFITMLAEYINDREWQKRHAVPATLSQMIVGCSEEMLADLTSVIQIASIS
SQDSHPRVRWAAIDLLEQLSKYLCPQLQNQHHQLVIPLLKKALLDFQNPRIQAHAASAIS
CFSQSCTSSILKHHLDVIVSMLLKLLQKGSQSLKEEALTALASLASSSQEHFQEYYVAVM
PYIKVMFMQGKSNHRLLAKAMECITMIWMAVGKEICRKDCQEVVELLISLQESQMEKDDP
MRICILEVCCV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgaagaacctggtatcagagacaaggccctggagctcctaggctctgaccca
caagctctccagactaacatcctcaacctcacctctcctgaccattctctgcactccaat
gcgcgaacccttctcgcttaccttggcagacactacaccaacagtctctgttttcgtgtt
tcttgcctcatcctttccacaagcgacgcctccattcgggaaaccatcgtaaactttctc
agactactcctgacagcctcaggctcccacttctggatgatcctctccatcattcaccga
aacgatatcaaacgagtatttcttgaatgtcttgaaaaagaaacttcaacaagagttgcc
aagattctctgtaagttggctttggatgttgcagtcgagtctgaatggcctgagcttgtg
ccattcatgcttaggtgttttgaggcttcagatattcgtgttcaagaaactagccttttc
ttgtttggtttactgtcggagactctcggggaaaagctgagttgtgagcctgacaagctg
cagtcactgttcttgaagtgtttgggttgtgagaattggagggtcagagctgcggcagtg
ggagcttcggtgagattgattgttttcttgatgggtacttcatctaatgacttgttggaa
caactaagtgcccccatcatggacacattcgatgatgctatggaaaatgggaaagagaga
tatgccagaaaggtggtcaagcatttgacagtgttaatgaggaagaaaccgggattcttg
aggagccgaattgatacttgcattgcatatatgttaattatggcagagaataaggtatgg
agtgagaaaagcaggcaccttgcagttaaattcttgatcactcttgctgaagaaagacac
caaggttttgctatgctgaagatgctgccggacaagataactaggatcttatctctattg
ttcaagatggtagccgatattaaggatgttaattcttggtatgaggcagagagccaccat
aagaattctggagaaacaaacaattgctgttatgggaaggagagcttgcggagatttgca
attgcaaagcatgtagatatcaccgacgagaagttcataactatgttggcagaatatata
aatgatagagaatggcaaaagcgccatgctgtacctgctaccttatctcaaatgattgtg
ggatgctcagaggaaatgctagcagatctgacgtcagttatacaaattgcttcaatatct
tcccaagattcccacccccgtgtgcgttgggcagctattgatttacttgagcaactctcc
aagtatttgtgccctcaactgcaaaatcagcatcatcaacttgtcattcctctattaaaa
aaagctttgcttgacttccagaatcccagaatacaggcacatgctgcttcagcaatttcg
tgcttcagtcagagttgcacctcaagcatcttaaaacatcacctcgatgttattgtgagt
atgttacttaagctcctccagaaggggagccaatcattgaaagaggaagctttaactgct
ttagcatcattagctagttcatcacaggagcactttcaagagtactatgttgctgttatg
ccgtacataaaagttatgttcatgcaaggcaagtctaatcacaggcttcttgccaaagcc
atggagtgcattacaatgatttggatggctgttggaaaggaaatttgtcgtaaggattgt
caagaggttgtagaactgctaatctcattgcaggaatctcaaatggagaaagatgatcca
atgagaatctgcatattagaagtatgttgtgtgtaa
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