Vitis riparia (riverbank grape): 117913299
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Entry
117913299 CDS
T07274
Name
(RefSeq) syntaxin-112-like
KO
K02201
pantetheine-phosphate adenylyltransferase [EC:
2.7.7.3
]
K08486
syntaxin 1B/2/3
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00770
Pantothenate and CoA biosynthesis
vri01100
Metabolic pathways
vri01240
Biosynthesis of cofactors
vri04130
SNARE interactions in vesicular transport
Module
vri_M00120
Coenzyme A biosynthesis, pantothenate => CoA
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
117913299
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117913299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117913299
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117913299
Enzymes [BR:
vri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.3 pantetheine-phosphate adenylyltransferase
117913299
Membrane trafficking [BR:
vri04131
]
SNARE
Syntaxin (Qa)
Stx-PM
117913299
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117913299
Exosomal proteins of other body fluids (saliva and urine)
117913299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
CTP_transf_like
SNARE
DUF4709
cas_Cpf1_2nd
SPX
FlgN
DUF5993
Motif
Other DBs
NCBI-GeneID:
117913299
NCBI-ProteinID:
XP_034684137
LinkDB
All DBs
Position
4:complement(19166429..19174046)
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AA seq
480 aa
AA seq
DB search
MAVSNSKDSFADSNLSPPNSYGAVVLGGTFDRLHDGHRFFLKASAELARDRIVIGVCDGP
MLSKKQFAGLIEPIEKRMHSVEEYIKSIKPELVVQLEPIIDPYGPSIIDENLEAIVVSKE
TLPGGLSVNKKRAEKGLSQLKVEVVDILPEDVTGEKLSSTALRRLEAESTVDSGDLETVA
EMNDLMTKSFLSYVELKKQAEMDLEAEAEADIEIGKLKPKDEENLSQFFEEVAAIKTVME
EITNLVRDLHNLNEETKSTHSAKVLRGLRDRMDSNALTILRKAKVVKARLEAIDKSNVRN
RRISEAYREGSPVDRTRISVTNGLRSKLRDMMNDFHSLRERILWDHRETLKRRYYNATGS
EASEEVVEKMMTGSVQIEAFEGKTGGDLVNRERNEALREIQRSLDKLRQVFLDMAVLVES
QGEKMDDIEENVAIAGNFVSGGTNSLVYAKQMKKGKKWVYWVWAVGLIILLVCFISMLTS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcaaattcgaaagactcctttgctgattcaaatctctctccaccaaattca
tatggagctgttgttctgggcggaacttttgatagattacacgacggccatcgctttttt
ctcaaggcatcggctgagcttgcaagggatcgtattgtcattggggtttgtgatggaccg
atgttgagtaaaaaacagtttgctggtctaatagaaccgattgagaaaaggatgcatagt
gttgaagagtatattaagtctatcaaaccagagctagtagtgcaacttgaaccgattatt
gacccctatggtccttcaatcattgatgaaaatttggaggctattgttgtcagcaaggag
actttacctgggggactatcagtaaataagaagagagctgagaaagggctctcacaacta
aaggttgaagttgttgatatcctccctgaggacgtgacaggagaaaaactgagttccaca
gcattgaggagacttgaggctgagagcacggtggatagcggggatctagaaacagttgca
gaaatgaatgatctcatgacaaaatcgttcttaagttatgtggaactaaagaaacaagca
gagatggatcttgaagcagaagcagaagcagacatagaaataggcaaactcaagcctaaa
gatgaagagaacctctctcagttctttgaagaagtggccgcaatcaagactgtcatggaa
gagattactaatctcgtccgtgatcttcacaacctgaatgaagagactaaatcaactcac
agcgctaaggttcttcgtggcctaagagaccgcatggactctaatgcactcactattctt
cgcaaggccaaagttgtgaaggcaagactagaagctatagacaaatcaaatgtaagaaac
cgcagaatatcagaagcatatagagaaggaagtccagttgataggacgagaatatcggtc
acgaatggattgagaagtaagcttagggacatgatgaatgatttccattcactgcgggag
aggatcttatgggatcatagagaaactctcaagagaaggtactataatgccactggaagt
gaagcaagcgaggaagtggtggagaaaatgatgacaggaagcgtacaaatagaagcattt
gaaggaaaaacaggaggggatttggtgaacagagagaggaatgaagccttgagggagatt
cagagaagcttggataagcttcgtcaagtattccttgacatggctgttttggttgagagt
caaggcgagaagatggatgatatagaggagaatgtggcaattgcagggaacttcgtcagt
ggtggaaccaatagtcttgtctatgccaagcagatgaagaaggggaagaaatgggtgtat
tgggtttgggctgtggggctcatcatattgctggtgtgcttcatttcaatgctcacttct
taa
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