Vitis riparia (riverbank grape): 117913312
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Entry
117913312 CDS
T07274
Name
(RefSeq) uncharacterized protein LOC117913312
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117913312
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117913312
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117913312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
117913312
NCBI-ProteinID:
XP_034684147
LinkDB
All DBs
Position
4:20720800..20728632
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AA seq
619 aa
AA seq
DB search
MSTAAAKALAGILVFVSYSVRLTYAIVHLKSLSASFIDAPARFAVSVNSTGICGALHLAD
PLEACSSLLNRFRSQEIDTIKFALIIRGKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVS
MIGNSQGIWVPAVFVSKAAGETLKIYAQGQEGECCIINPSFPESAWTVMVISFISLLVIA
TVVLTFFLTRNRRLNQRGANPHRPSVDAKLVEVLPCFTFSQACECRVGDTCSICLEDYKD
GERLRVLPCHHEFHASCVDSWLTKWGTFCPVCKYELSTDATCSKVNERRTFLFFYPATEF
ISADAHEAKDLIASGYRYLDVRMVEDFNKGHVDVESVFNIPYFIMTPEGRVKNPQFLEQV
LSVCSKQDGLIVGCGTGGRSRLATVDLLNAKQDSDSFREPDQQDTSFPYSSGFPSPETLR
YRPLLSTSWPLLSVVLVCAILFLYSCEFLYIHKAMGVLWAVFRCRFQFLLLFLLLSCSSA
TEVVTIDVHAAKDLINSGYRYLDVRTVEEFKKGHADVENILNIPYLFTTPEGRLKNPEFL
EQVQSACSKEDHLVVGCLGGVRSLAAASVLVNADFKDVKDMGGGEAMRHEWKLDLQSPNQ
KKKRSDWMLHCKARPLPMH
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgctgcagccaaagcccttgctggaattctagtgtttgtttcttactctgtt
cgcctcacctacgctattgttcacctcaaatccttgtccgcttccttcattgacgctccc
gccagatttgctgttagtgttaacagcactggaatatgcggagctttgcatttggcagat
cctctcgaggcatgttcttctctgctcaacaggtttcgatcccaagaaattgatacaata
aaatttgctctgataattaggggtaaatgtgcttttgaggataaagtccgaaatgctcaa
gatgctggctttcatgctgtaatcgtgtatgatgatcgagataagggaaatttggtttcc
atgataggaaactcccagggcatatgggtgcctgcagtttttgtttctaaggcagctggt
gaaaccctgaagatatatgctcaaggacaagaaggggaatgctgcattataaacccttca
ttcccagaatctgcctggactgtgatggtaatatctttcatctcacttcttgtcatagca
actgtcgtgttaacgttctttctcactcgcaaccgccggttgaatcaacgaggagcaaat
ccccaccgtcctagtgtggatgccaagttggtggaagttcttccctgctttacattcagt
caagcatgtgagtgccgcgtaggagatacatgttccatctgtcttgaggactacaaagat
ggtgaacggctcagagttctcccctgccaccatgaatttcacgcgagctgtgtggactca
tggcttacaaagtgggggactttctgcccggtttgtaaatatgaattgagtactgatgcc
acatgttctaaagtgaatgagaggagaacatttttatttttttacccagcaacagaattt
atcagcgctgatgctcatgaagctaaggatcttattgcctccggctatagatatctagat
gttaggatggtggaagatttcaacaaaggccatgtggatgttgagagcgtctttaacatc
ccttacttcatcatgaccccagagggtagggtgaaaaatcctcaatttttggagcaggtt
ttgtcggtttgcagcaagcaagatggtctcattgtgggctgtggaaccgggggcaggtct
cgtctagcaacagttgatcttcttaatgccaaacaggactcagattcattccgcgaacca
gaccagcaggacacatcgtttccatattcatccggttttccttctccagaaaccctaaga
tataggcccctactctctacctcatggcctctcctaagtgtggttcttgtttgcgccata
ctttttctatatagctgcgaatttctatatattcacaaggccatgggtgttctttgggct
gtgttccgttgtcgatttcagtttcttcttctgttccttcttttgtcttgtagctcagca
acagaggtcgtcaccattgatgttcatgcagctaaggatctcatcaattcaggctaccgt
tatcttgatgtcaggacggttgaagagttcaagaaaggccatgccgatgttgagaacatt
ctgaacatcccttacctcttcaccacccctgagggaaggctgaaaaatcctgaattcttg
gagcaggttcagtctgcttgcagcaaggaagatcatctcgtcgtgggatgtctaggtggg
gtgagatcccttgcagccgcctctgttcttgtcaatgctgatttcaaggatgtgaaggac
atgggaggaggggaggctatgaggcatgagtggaaactggacttacagtcaccaaaccaa
aagaagaagagaagtgattggatgcttcactgtaaagctagacctttgcctatgcattaa
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