Vitis riparia (riverbank grape): 117913451
Help
Entry
117913451 CDS
T07274
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vri03021
]
117913451
Transcription machinery [BR:
vri03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
117913451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
117913451
NCBI-ProteinID:
XP_034684328
LinkDB
All DBs
Position
1:5265709..5390716
Genome browser
AA seq
1648 aa
AA seq
DB search
MDPNPRPSSRAYQLHPARSSIVDLFNLYLGRSSHQKPEDSNREPPNKTQKRVTALNRELP
PRNEQFLLDFGQLQSQFSDQDQLRSVTESILISLVVPCSGHAPRAEFLLFALRSLCSIGY
INWDTFLPSLLSSVSSAEMSVGQGNQAVTSVSSTSLSPSGMLPSSSTIHNSSTFQSSNPA
SPLPSVHGISSPAQSATDPSPCVALSPVKSSDISCSGQQSTMRVNSTIRDNTLSFLRQLC
CKIILTGLDFNLKPVTYAEIFNHMLNWLVNWDQRQQESDVAKSWRPDKALIEWLHSCLDV
IWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLQ
CPTFGTHRFLSQTTSPISGEAVANLRYSPIMYPSVLGEPLHGEDLANSIQRGSLDWERAL
RCIRHALRTTPSPDWWKRVLLVAPCYRSHPQGPSAGAVFTSEMICEATIDRIVELLKLTN
SEINCWQEWLVFSDIFFFLMKNGCIDFVDFVDKLILRLIEGDNHILRTNHVTWLLAQIIR
VELVMNALTSDPRKMETTRKILSFHKEDRSSDPNNPQSILLDFISSCQNLRIWSLNTSTR
EYLNNEQLQKGKQIDEWWRIAGKALTGSSIGVATCTSGALLGGTTGVGSEGVAGSFSGMG
KTKVDSSTTTTGERMMDYVTLDDRSIGMFWVMSYTMAQPACDTVMNWFSSAGAAELIPGS
HLQSNERVMVMKEISPLPMSLLSGFSLHLCMKLAFQMEDSLFSGQVVPSIALVETYTRLL
LIAPHSLFRSHFSHLSQRYPAILSKPGATLLVLEILNYRLLPLYRYQGKGKTLMYDVTKI
VSALKGKRGDHRAFRLAENLCMNLILSLRDPFQVKKEGKGPTEFTETLNRITIITLAIII
KTRGIAEADHLPYLQTMLEQIMATSQHTWSEKTLRYFPSLLREAMIGRIDKKSLAIQAWQ
QAETTVIAQCTNLLLSSGDPSYVMTYISHSFPQHRQYLCAAACMLMHGHPDNINVANLAR
VLRDFSPEEVTSNIYTMVDVLLHHIHMELQHGHSLQDLLSKACANLAFFIWTNELLPLDI
LLLALIDRDDDSHALRIVISLLDKQELQQRVKLFCVNRGSPEHWLYSGMFKRTDLQKALG
NHLSWKERYPVFFDDAAARLLPVIPLVVYRLIENDATDQADRVLAMYSQLLAYHPLRFTF
VRDILAYFYGHLPGKLTVRILNILDLGKIPFSESFLKHMSSSNPVICPPLDYFATLLLGL
VNNVIPPINTNSKSGSMGDTSNNTLRAPHNKTPAASQSGPTNASEGQKSFYQTQDPGTFT
QLVLETAVIEILSLPVPATQIVSSLVQIIVHIQSTLIQSSNGLHGPPNGVGQGSVLPTSP
SGGSTDSLSASRSSASVSGINTSNFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHKQLY
IEASRLIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHAFFSNL
PQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMGPLLPRLSNAHSLFNKTLSLLLNIMVDVF
GRNSQPATPVEASEIADLIDFLHHAVHYEGQGGPVQASSKPRPEVLALCGRASESLRPDI
QHLLSHLKTDINSSIYAATHPKLVQNTS
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaacccgagaccatcttctagggcttaccagcttcaccctgcccgatcctcc
atcgtcgacctcttcaatctctacttaggaagaagttcccaccaaaaacctgaggattca
aatcgggaacctccgaacaagacacaaaagcgtgtaactgctctaaacagagagcttcct
cctcgaaatgagcagtttcttttagattttgggcagctccagagccagttttctgaccag
gatcaattgcgttcggtgacagaatctatccttatatctctggttgtgccttgcagtggt
catgcaccacgggctgaatttcttctctttgctttacggagcttgtgcagcataggatac
ataaactgggacacgtttttgccatcccttctttcttcagtttcttctgcagagatgtca
gttggtcaggggaatcaagcagtgacttctgtctcatctacgagtttgtcaccatctggg
atgttgccatcttcaagcacaattcacaattcttccacttttcagtcatcaaatcctgca
tcaccattgccttcagttcatggtatcagctctcctgcgcagtcagcgactgatccatca
ccttgtgtggccttgtcacctgttaaatcctccgatatttcctgcagtggacagcagtct
actatgagggttaattcaaccataagagacaatactctaagctttctacgccagctttgt
tgtaagattattttaaccggcctggactttaatttaaagccggtgacttatgctgaaatt
ttcaatcacatgctgaactggctggttaattgggaccaaagacaacaggaatctgatgtt
gcaaaatcatggagacctgacaaggctctaattgaatggctgcatagttgtttggatgtg
atttggctgttggttgaggaggataaatgtcgtgtacccttctatgaattactccgcagt
ggcttgcagtttatagaaaacataccagatgatgaagccttatttacacttatcttggag
atccataggaggagagatatgatggccatgcacatgcaaatgctagatcaacatcttcag
tgccctacatttggaactcatcgttttctgtcacagacaacttctcctatttcaggtgaa
gcggtagccaacttgcgatattcaccaatcatgtatccaagtgtgctaggagaacctttg
catggagaggatcttgcaaattctattcagagagggagtctggattgggagagggctttg
cgttgtataagacacgctcttcgaactactccatcacctgactggtggaagcgtgtgctg
cttgtggctccttgttataggtctcatcctcaaggaccttctgctggtgctgtttttact
tctgaaatgatttgtgaggcaacaattgatagaatcgttgaactattgaagttgacaaat
tcagagataaattgctggcaggagtggcttgtattttcagatatattcttttttcttatg
aaaaatggatgcattgattttgttgattttgtggacaagcttattttacgcctgatagag
ggagataaccatattcttcggacgaatcatgttacttggctgcttgcacagattattcgg
gttgagcttgtgatgaatgcattaacctcagaccctagaaagatggagacaactagaaag
attctatcatttcataaagaagatagaagctctgatcctaacaatcctcaaagcatccta
cttgactttataagcagttgtcagaatttacgaatttggtccttgaatacatcaaccaga
gaatatttgaacaatgagcaacttcagaaagggaagcaaatagatgaatggtggagaata
gcaggcaaagctcttacaggaagttcaataggagttgcaacatgcacatcaggagcatta
ttgggtggaacaacaggtgtgggttctgaaggagtagcaggttcgttctcgggcatggga
aaaaccaaagttgattcctcaacaacaacaacaggggaacgcatgatggactatgtgact
ttggatgatagatcaattggaatgttttgggttatgtcttacaccatggcacagcctgct
tgtgacactgtgatgaattggttctcctctgctggagcggcagaattgataccgggatca
catttacagtccaatgagagggtaatggtgatgaaggaaataagcccattgccgatgtca
ttattatctggattttcattgcacttatgtatgaaactggcctttcaaatggaagattct
ttgttttcaggacaggttgtgcctagcattgcattggttgaaacatatactcgattgctg
ctaattgcaccgcactctttatttcgttcacacttcagtcacttgtcacagaggtatcct
gcaatattaagcaagcctggggcgactcttttggtgcttgagattttgaactaccgcttg
cttccactctacaggtaccaagggaaaggcaaaaccttaatgtatgatgttacaaaaata
gtttctgcacttaaagggaaacgtggagatcatcgtgcatttaggttggcagaaaacttg
tgcatgaatctaattttgtcattgagagacccttttcaagtgaaaaaggaagggaagggt
ccaactgaatttacagaaactttgaatcgtataacaataattactcttgccatcatcatt
aagacacgtggaattgctgaagctgatcacctgccttatctacaaactatgttggaacaa
ataatggcaactagtcaacatacgtggtcagaaaaaactttacgttatttcccttccctg
ctccgtgaagccatgattggacggatagataagaagagcctggcaattcaagcatggcag
caggcagaaacaactgtgatcgcccaatgcaccaatcttcttttatcatctggtgatcct
agttatgtcatgacctacatcagtcatagttttcctcagcaccgacaatatctatgtgct
gctgcatgtatgctgatgcatgggcaccctgacaacattaatgttgcaaacctcgcacgt
gtcttaagggatttttcccctgaagaagtgacatcaaatatttacacaatggtggatgtt
cttcttcatcacattcatatggaactgcagcatggacattccttacaggaccttttatca
aaagcttgtgcaaaccttgcatttttcatttggaccaatgagctgcttcctttggatatt
ttgcttctagcacttattgaccgtgatgatgattcccatgctttacgtattgtgattagt
ctactagacaagcaagaacttcaacaaagagtaaaattattctgtgtgaaccgtgggtcc
cctgagcattggctttattctggaatgtttaagcgtactgatttgcaaaaggcacttggg
aaccatctctcttggaaggaaaggtatcctgtgttctttgatgatgctgccgcacgtttg
cttccagtcattcccttggtggtttataggcttattgaaaatgatgccacagatcaagct
gacagggttctggccatgtattctcaattgcttgcttaccaccctttaagatttacattt
gtccgtgacatacttgcatacttttatggacatcttccaggaaagctcactgtccgaata
ttgaatatacttgatttgggcaagatcccattttctgaatcattcctcaaacacatgagt
tcatcaaatcccgtcatatgcccacctctcgactattttgctactttgttattgggcctt
gtgaataatgttatacctccaataaataccaactcaaaatctggttcaatgggagatact
tcaaataatacactgcgtgcaccacataacaaaactccagcagcatctcaatccggacca
acaaatgcttctgaaggccagaaatcattctatcaaacccaggatcctggtacatttact
cagctggttcttgaaacagcagtcatagaaatactctctctccctgtacctgcaacacag
attgtatcatcacttgtccaaatcattgttcatatacaatcgactttaattcagtccagc
aatggtctgcatggaccaccaaatggtgttgggcaaggttcggttttaccaacttcccct
tcaggtggaagcacagattccttaagtgcaagccgatcaagtgcttcagtttcaggaata
aatacgtctaactttgtttccagaagtggttacacatgtcaacagttatcttgcttgtta
atccaagcttgtggtctgctattagctcagctccctccagattttcacaaacaactctat
atagaggcatcacgtctaataaaagagagttggtggcttactgatgggaaaagatcattg
ggggaactagactctgctgtaggctatgctttgttagatccaacatgggctgctcaagac
aacacctcaacagccattggtaatatagttgccctccttcatgctttcttcagtaacctg
ccacaggaatggctagaagggacgcatctcattatcaaacatctcagacctgtaacatca
gttgcaatgttaagaatagcattccgtataatgggtccattgctcccaagactctctaat
gctcactcactcttcaacaagaccctgtctttgcttttaaatataatggtggatgtcttt
gggaggaattctcagccagcaactcctgttgaagcatcagaaatagcagatctcattgac
ttccttcatcatgctgtccattatgaaggacagggagggccggtgcaggctagcagcaag
cccagaccagaagttttggctctctgtggaagagcatcagaaagtctgcgtccagatatt
cagcatcttctttcccatttaaaaactgatataaattcctctatttatgctgcaactcat
ccaaagctagtccagaatacctcgtaa
DBGET
integrated database retrieval system
