KEGG   Vitis riparia (riverbank grape): 117913453
Entry
117913453         CDS       T07274                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03083  Polycomb repressive complex
vri04120  Ubiquitin mediated proteolysis
vri04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117913453
   04120 Ubiquitin mediated proteolysis
    117913453
  09126 Chromosome
   03083 Polycomb repressive complex
    117913453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117913453
   04121 Ubiquitin system [BR:vri04121]
    117913453
   03036 Chromosome and associated proteins [BR:vri03036]
    117913453
Membrane trafficking [BR:vri04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    117913453
Ubiquitin system [BR:vri04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     117913453
   Cul7 complex
     117913453
Chromosome and associated proteins [BR:vri03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     117913453
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     117913453
SSDB
Motif
Pfam: Skp1 Skp1_POZ Nse4-Nse3_bdg
Other DBs
NCBI-GeneID: 117913453
NCBI-ProteinID: XP_034684326
LinkDB
Position
4:21014441..21016343
AA seq 154 aa
MASRKVNLMSSDGVTFEVDDIVALELQTIKHMIEAGFSDGAIPLPNVTSGILAMVIEYCK
MHVESSKSEDRSADDNLKAWDAEFVKVDVATLFHLIMAANYLNIQSLLELTCQTVADMMK
GKSVEYIRKTFNITNDYTPEEEEEIRREFPWVFE
NT seq 465 nt   +upstreamnt  +downstreamnt
atggcgtcgaggaaggtgaacttgatgagctccgatggcgtgacgttcgaagtggacgac
atcgtggcgttggagttgcagacgatcaagcacatgatcgaggccggtttttccgacggc
gccattcctctcccgaacgtcaccagcggtatccttgcgatggtgatcgagtactgcaag
atgcacgtggagagttccaagtccgaggatcgcagcgccgatgataacctcaaggcctgg
gatgccgaattcgtcaaggttgatgtggctactctgtttcatctcatcatggctgccaat
tatttgaacatccagagcttgctggagctaacatgccagacagttgcagacatgatgaag
ggaaagtccgtagagtacatacgcaagaccttcaacattacaaatgattacactccagag
gaggaggaagagatccgtcgggaattcccctgggtttttgaatga

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