Vitis riparia (riverbank grape): 117913489
Help
Entry
117913489 CDS
T07274
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vri03036
]
117913489
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117913489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
HDA2-3
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
117913489
NCBI-ProteinID:
XP_034684367
LinkDB
All DBs
Position
1:20828273..20856461
Genome browser
AA seq
728 aa
AA seq
DB search
MKRDFTEISDDEWDNHSFKLSRALKKSQGAPPPIESFSYRPEDPQVSPEDVSDGSSDDCV
EIKEDLEDDDAEVLAAPVSRGRRFVVDEDSDEDFAEVVEVKSGTEEEAEEEVEDDDVVGK
ALQKCAKISAELRRELYGSSVTACDRYAEVESSSVRIVTQDDIDVACGAEDSDFQPVLKP
YQLVGVNFLLLLYRKGIGGAILADEMGLGKTIQAITYLTLLKHMDNDPGPHLVVCPASVL
ENWERELKKWCPSFTVIQYHGARRTHYSKELNSLSKAGLPPPFNVLLVCYSLFERHSQQQ
KDDRKLLKRWQWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDLHELW
SLLEFMMPDLFTTGDVDLKKLLNAEDRDLIARMKSILGPFILRRLKSDVMQQLVPKIQRV
EYVYMEKNQEDAYKEAIEEYRAASRARIAKISDVNCNSVVGVLPRRQISNYFVQFRKIAN
HPLLVRRIYNDEDIVRFAKKLYPMGVFGFECNLDRVIEELKSYNDFSIHRLLLYYDVADK
KGILPDKHVMVSAKCRALAELLPTLKQRGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLD
GSTQVTDRQTIVDTFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAED
RCHRIGQTKSVTIYRLVTKDTVDENVYEIAKRKLILDAAVLESGVEVDDEAGMSEKTMGE
ILSSLLLG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgatttcacggaaatctccgacgacgagtgggacaaccactccttcaagctc
tcccgagccctcaaaaagtcccaaggagcacctccgcccatcgagtccttctcttaccgg
ccggaggatccccaggtttcgccggaggatgtttccgatgggagcagcgatgattgcgtc
gaaatcaaggaggacttggaggatgatgacgcggaggttctggcggcgccggtgagtaga
ggtcggaggtttgtggtggatgaggatagtgatgaggattttgcagaggtggtggaggtg
aagtcggggacggaggaggaggcggaggaggaggttgaggatgatgatgttgtcggtaag
gctttgcagaagtgcgcgaagatatcggcggagctcaggcgagagctttacggttcttcg
gtgactgcctgtgaccgctacgcggaagtggagtcttcttccgtgaggattgtgactcag
gatgatattgatgtggcttgtggggcagaggattctgattttcagcctgttctcaaacca
taccaactcgttggagtcaactttcttctcctgttgtataggaagggtataggaggagcc
atcttggcagatgagatgggtctcggtaaaaccattcaggctataacatatttaaccttg
ttgaaacacatggacaatgaccctggtccccatttggttgtatgtcctgcttctgttctc
gaaaactgggaaagagagcttaaaaagtggtgcccatcattcactgtgatccaatatcat
ggggctaggcgaacacattattcaaaagagttgaactctttgtcaaaagctggattaccc
cctccatttaatgtacttcttgtgtgttactcgctttttgaacgacacagtcaacagcag
aaagatgaccgtaaacttctaaaacgttggcaatggagctgcgtgctcatggatgaggcc
catgctttgaaggataagaacagctataggtggaaaaacctgatgtccgttgcacgaaat
gcaaaccagcgtctgatgttgacggggacaccactccaaaatgatttgcatgagctttgg
tcattattggagtttatgatgcctgatctttttacaactggagatgtggacttgaagaag
ctattaaatgcagaagatagagatttgattgctcgtatgaagtccattcttggaccattt
attttgaggcgtttaaagtctgatgtaatgcagcaacttgtcccaaagatacagcgggtt
gagtatgtgtacatggaaaagaaccaggaggatgcttataaagaagccattgaggagtac
cgtgcagcttcacgggctcgaattgcaaaaatttctgatgtcaactgcaacagtgttgtt
ggagttcttcctcggcgtcagatttcaaattattttgttcagttccgaaagattgcaaat
catcctttactggtgaggcgtatttacaatgatgaggatattgttcgttttgcaaaaaag
ttatatccgatgggtgtgtttggttttgaatgtaacttggacagagtaattgaagagctt
aagagttacaatgacttctctattcaccggcttttactctattatgatgtcgcggataaa
aagggcatccttccggacaaacatgtcatggtttcagcaaaatgtcgggcattagcagaa
cttctccccacactcaaacaacgtgggcaccgggttctaatatttagccagtggacatca
atgcttgacattctggagtggactttggatgtaattggagtgacatatagacgacttgat
gggagcacacaggtgacagacagacagacaattgtggacacattcaataatgatacttct
atatttgcctgcttgctgtccacaagagctggagggcagggtctgaacttgactggagct
gatacagttgtcatccatgacatggatttcaacccacagattgaccgtcaagctgaagat
cgatgtcatcgcatcggccaaacaaaatctgttactatatacaggctggtgaccaaagat
acagtggatgagaatgtttatgagattgcaaagcggaagctaatcttggatgctgcagtg
ctcgagtcaggtgtggaggtggatgatgaagctggcatgtctgaaaagactatgggagag
atattatcgtcacttttgcttggttag
DBGET
integrated database retrieval system
