Vitis riparia (riverbank grape): 117913492
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Entry
117913492 CDS
T07274
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117913492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117913492
03051 Proteasome [BR:
vri03051
]
117913492
Membrane trafficking [BR:
vri04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117913492
Proteasome [BR:
vri03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117913492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
XPC-binding
STI1-HOP_DP
Ubiquitin_2
TBK1_ULD
Dsc3_N
Rad60-SLD_2
Elf4
Motif
Other DBs
NCBI-GeneID:
117913492
NCBI-ProteinID:
XP_034684368
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Position
4:21741147..21746069
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AA seq
377 aa
AA seq
DB search
MGGGDGVAGDASESNAGGGVTVHVRCSNGSKFSVQISLESTVRAFKAVLSQNCDIPAEQQ
RLIYKGRILKDDQTLESYGLEADHTVHLVRGFAPPAPADKAGPADSGRPNTTPPSIPTDA
GLNEGGALGGSGFGASLFPGLGINGLGGTGGLFGAGLPEFEQMQQQLTQNPSMMREIMNM
PVVQNLMNNPDIMHNLIMSNPQMREIIDRNPELAHILNDPSTLRQTLEAARNPELMREMM
RNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMSGDSGSDLGSNPFAALLGTQGGV
QAHDRSANPPTAGSDTTNNSPAPNTNPLPNPWTPGGGGGKKFHSLNFLKNVLVSGQTVHL
SLILFILFNSSVILFNF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggtgatggagttgccggcgatgctagcgaatcgaacgccggcggtggagtc
accgttcacgtccgatgctccaacggttcgaagttctctgtccagattagcctcgaatcg
accgtcagagcattcaaagccgttctctcgcagaactgcgatattcccgcggagcagcag
cgattgatttacaagggacggatcttgaaggacgaccaaaccctagagagctacggcctg
gaggcggatcacactgtccacttggttcgtggttttgccccacctgcaccagctgacaag
gctggtccagccgattcagggcgtccaaatactactcctccaagtattcctacagatgct
ggtttgaatgaaggtggggcattaggaggttctggttttggagcttccctctttcctgga
cttggtatcaatggtttaggtggcactggaggtttatttggggctggacttccagagttt
gagcaaatgcagcaacagttgactcaaaaccccagcatgatgagagaaataatgaacatg
cctgttgttcagaacttaatgaataatcccgacataatgcataacttgattatgagcaat
cctcaaatgcgtgaaataattgatcgaaatcctgagctagcacacatacttaatgatcct
agtactctccgtcagaccttagaagctgcaagaaaccctgaactcatgcgtgagatgatg
cgtaatactgacagagcaatgagcaacattgaatcatcccctgagggattcaacatgctc
aggcgcatgtatgaaactgttcaagagccatttctgaatgcaactacaatgtctggggac
agtggaagtgatttaggatcaaacccttttgcagctcttttagggacccaaggtggggtt
caggcccatgatcgatctgctaatcctccaaccgctggttctgatacaacaaataattct
cctgctccaaatacaaaccctcttcccaacccttggaccccaggtggtggtggtggtaag
aaatttcactctcttaattttcttaagaatgttctggtttcagggcagacagttcacctt
tctcttattctttttattcttttcaattcttctgttatacttttcaacttttaa
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