Vitis riparia (riverbank grape): 117913507
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Entry
117913507 CDS
T07274
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00730
Thiamine metabolism
vri00900
Terpenoid backbone biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
117913507
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117913507
Enzymes [BR:
vri01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
117913507
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GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Toprim_Crpt
E1_dh
TPP_enzyme_C
Motif
Other DBs
NCBI-GeneID:
117913507
NCBI-ProteinID:
XP_034684391
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All DBs
Position
4:4733151..4745180
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AA seq
719 aa
AA seq
DB search
MGTACAQYPFEVTAHFQEKCRGLHPKTKFSSFNFPPKLDSSRMNLYPCSSSTNSSKRYVG
QICSLPDFGDFFWDRIPTPMLDMVENPMCLKNLTPKELKQLADEIRVELFCIMSKMQKPF
KASLAVVELTVAIHYIFHAPMDKILWDVGEVTYAHKILTGRRALMHTLRERGGLSGFTSR
SESEYDPFGAGHGCSSISAGLGMAVARDLKGKRERIVTVIGNGTTMAGQVYEAMGNAGYL
DSNMVVILNDSRHSLHPKLEDGQATPINALSSTLTKLQSSKSFRKFREAAKGVTKRIGKG
MHELAAKVDEYARGMVGPLGATLFEELGLYYIGPVDGHNIEDLISVLQGVASLDPTGPVL
VHVITKEYQGVEASQKSMISNGHLKGFYASELSPYPLPRMYSDCFVEALVNEAEKDKDIV
VVHAGMGMEPPLQLFQEKFPYKFFDVGMAEQHAVTFSAGLACGGLKPFCIIPSTFLQRAY
DQVVHDVDRQRIPVRFAITSAGLVGSDGPTRCGAFDITFMSCLPNMIVMAPSDENELMHM
VATAAHVDDRPICFRYPRGATAGMSNSIWNGIPIEIGKGKVLIEGKDVALLGYGVMVQNC
LKAWSLLSELGIRVTVADARFCKPLDIQLVRELCENHAFLITVEEGSVGGFGSHVAQFIA
LDGKLDGRIKWRPIALPDNYIEQASPEEQLAIAGLTGHHIAATVLSLLGRNREALLLMQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgcttgtgctcagtacccgtttgaagtgactgcccatttccaagaaaaatgt
aggggtttacatccgaaaacgaagttctcaagctttaattttcctcccaaattggattct
tcgagaatgaacttatacccatgttcatcttccaccaactcctccaagaggtatgttggt
caaatatgttctctacctgactttggtgatttcttctgggacagaatcccaacccccatg
cttgacatggtcgaaaaccctatgtgcttgaagaatttgactcctaaggagctgaaacaa
ttagctgatgaaatccgtgtagagttgttttgtatcatgtcaaaaatgcaaaaacctttt
aaagccagtctggcagtggtggagctgactgttgcaattcactacattttccatgctcca
atggacaagatactttgggatgtgggggaagtgacatatgcacataaaattctcactgga
aggcgggcccttatgcatacactgagagaaaggggtggtctttcaggttttacatctcgt
tctgagagtgaatatgacccatttggtgcagggcatggatgcagcagtatttctgctggg
cttggcatggcggttgctcgagatttgaaagggaaacgggaacgtatagttacggtgatt
ggcaatggaacaactatggctggtcaggtttatgaggcaatgggcaatgcaggttatttg
gactcaaatatggtagtaatattaaatgacagtcgtcattctttacacccaaagctcgaa
gatggtcaggctacaccaattaacgctttatctagtactctaaccaagctccagtcaagt
aaatccttccgaaaatttagagaagctgctaagggtgttaccaagagaattggtaagggc
atgcatgagctggctgctaaagtagatgagtatgcccgtggtatggtgggtccactggga
gcaacactctttgaagagcttggtctatattacattggtcctgttgatggacacaacatt
gaagatctcatttctgttttacaaggggtggcatctttggatccaactggtcctgtgttg
gttcatgtaataacaaaggaataccagggagtagaagctagccaaaagagtatgatttca
aatggacatctgaaaggtttctacgcctctgaattatcaccatatcctctcccgagaatg
tatagtgattgctttgtggaggctttggttaatgaggcagaaaaggacaaagacattgtg
gtggttcatgcaggaatgggaatggaaccaccacttcaactatttcaggaaaaatttcct
tataaattttttgatgtgggaatggcggagcaacatgcagttacattttctgctggtttg
gcttgtgggggattgaaaccattttgcataatcccatctaccttcctacagagagcttat
gatcaggtagttcatgatgtggatcggcagagaattcctgttcgttttgccattacaagt
gcaggactggtagggtctgatggtcccacgcgctgtggagcttttgacataacattcatg
tcctgtttacctaacatgattgtcatggcaccatctgacgaaaatgagctcatgcacatg
gtggccactgcagctcatgttgatgatagaccaatttgcttccgatatcctaggggcgcc
actgctggaatgagtaactctatatggaatggaattcccattgagattggaaaaggtaaa
gtcctcatagagggtaaagatgttgctctgcttgggtacggagttatggttcagaattgc
cttaaggcttggtcgctcctttcagagcttggaattagagtaactgttgctgatgcgaga
ttttgcaagcctcttgacatccagcttgttagagagctctgtgaaaaccatgccttctta
attactgttgaggaaggctctgttggagggtttggatcccatgttgcacaattcattgct
cttgatggaaagctggatggaagaattaagtggcgacccatcgctctacccgacaactac
atagaacaggcatcaccagaggagcagctggctattgcagggctcaccggccatcacatt
gctgcaacagtactaagtctgctgggccgtaaccgtgaagctctcctgttaatgcagtag
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