KEGG   Vitis riparia (riverbank grape): 117913520
Entry
117913520         CDS       T07274                                 
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117913520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117913520
Spliceosome [BR:vri03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    117913520
 Complex B
    117913520
 Complex C
   U2 SnRNP specific factors
    117913520
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5 RRM_10 PH_26
Other DBs
NCBI-GeneID: 117913520
NCBI-ProteinID: XP_034684407
LinkDB
Position
4:18603504..18613079
AA seq 373 aa
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNM
GAPMPPRPFANGVVPPVPIPAMRPPPPQSGAYPPMQLAGPPSWQGQPQQPGQPMQPPMMP
PPPLQQFRPPPPNMPPPPQQVMPALSRPPPPPALMGGPPPVWRPPPPPQQMAGRPPTMLQ
MSMPPPPPPPAAG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgacgactcgaatcgctccgggcgtcggagccaacttgctaggccaacactccgccgag
aggaaccaggatgccactgcttacgtcggcaatctcgatcctcaggtaaccgaggagtta
ctgtgggagttgtttgttcaagcgggccctgttgttaatgtatatgttcccaaagataga
gtgacaaatctgcaccaaggatatggatttgtagaatttcgaagtgaagaggatgctgat
tatgcaattaaggttctgaatatgattaaactttatgggaagccaatacgtgtaaataag
gcatctcaagataaaaagagcttggatgttggagcaaacctttttgttggaaaccttgat
cctgatgtggatgagaaacttctgtatgatactttcagtgcatttggagtcattgtcaca
aatcctaagataatgagagatcctgatacaggaaattctcgtggttttggtttcgttagc
tatgactcttttgaggcatctgatgcagctattgaggcaatgaatggtcaatatctctgc
aaccggcagataacagtgtcctatgcatacaagaaagacactaaaggggagcggcatggt
accccagcagaaagggttttggctgcaagcaatccaagtgctccaaagagcaggccccac
accttgtttgcgagcggacctcctacacttcccaacgttcctcaggccaatggtaacatg
ggtgctccaatgccgccacgtccctttgcaaatggtgttgttcctccggtcccaattccc
gcaatgcgccccccacccccacaaagtggagcctacccacccatgcagctagctggacca
ccatcttggcaagggcagcctcagcaaccgggtcaaccaatgcaaccacctatgatgcct
ccgcccccacttcagcagttcaggccgcctcccccgaacatgccaccaccccctcaacag
gtaatgccagctctctcaagacctcctccaccaccagcattaatggggggccctccccct
gtttggcggccacccccaccccctcagcaaatggctgggaggccccctactatgcttcag
atgtcaatgccgccacctccaccacctcctgcagcaggttga

DBGET integrated database retrieval system