Vitis riparia (riverbank grape): 117913576
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Entry
117913576 CDS
T07274
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117913576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117913576
03036 Chromosome and associated proteins [BR:
vri03036
]
117913576
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117913576
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117913576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
117913576
NCBI-ProteinID:
XP_034684470
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All DBs
Position
4:2889058..2897634
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AA seq
715 aa
AA seq
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MPGLTADSGNALVPLSPEAHVSVVYPLHHGLKPPISRLSISWSRGNALRVSVFRELPAES
SDSDGEAGGKVVQVKLGVADGEVDDAQWRRIAYGSVSPFALLQSRRNSVLALSKMSMSSS
PYHPDWWEYVMEYCKDISSLLDNAKSLPNSVIDDPKTVLKKVEEPTCLKAAWGLLEIFYA
DKESQAWLPERIVDWLADYDILFSGTQATVHSKLVEFQKEIVRLQAIEDDPRYWEVITSA
LAVGWLEIVVKLLRLHGSYQLDQLSNRETENGLVEAVAILISKMPRMRSELEAGRLGECF
KTKPDFIKAWEKWRAQITKLDCSSFWVQCDHRQTRDGLRNMLQVMLGNTNNLCTSTCHWI
ELYISHFLYVRPFTVGLESMHALAQKCIQLKPISSSHRLMGLIIGILGENTEVVLAECSR
AFGPWMVAHAIELLTAGSDQAEIILQEERDNLGGISIEELHRLVYAQVLSSHALTWQIAP
IYLTSCMKQGMGLLEVLLYKQPVQDNQMLLKTTEICRLYDLESISSSIMKIAGVYHWKHG
RKGSGVFWLQQARDEFRLNRIAQQLFDFVGRSISDESFKQWEGLIELLGSESKIAGGLDF
LHKYRDFKKSLQQVQVGKTTDAAQQAVESLISLMRNPSTPQRFWLPLLHDSLKLLSWQER
PLLNVNQTNLLLNKLQELSMARLRPDFIEANLPPQALSSVRLALATNLGRAILEE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcctgactgcagattctggcaacgctctcgtcccactctcgcctgaagctcat
gtatccgtcgtttatcctctccaccacggcctcaagcccccgatctctcgcctctctatc
tcttggtcccgaggcaacgcccttcgtgtgtcagttttccgggaacttccggctgagtcc
agtgactcggacggtgaagctggtgggaaagtggtgcaagtgaagcttggagtcgcagat
ggagaggtcgatgatgcgcagtggcggaggattgcctacggttccgtttcgccgtttgcg
cttctccagagtcggaggaattcagttttggcgttgtctaaaatgtcgatgagttcgtct
ccttatcaccctgactggtgggagtatgtgatggagtactgcaaagacataagttctctt
ctggataatgcaaagtcacttcctaattcggtgattgatgaccccaagacagttttaaag
aaagttgaggagcctacatgtttgaaggctgcatgggggctgttggagatattctatgca
gacaaggaatctcaagcatggcttcctgaacggattgttgattggttagctgattatgat
atcctcttctcaggaacacaggcaactgtccattcaaagcttgtggaatttcaaaaagaa
attgtccgtttacaggctattgaggatgatcctagatattgggaagtaataacatcggca
ctagcagttggctggttagagattgttgtgaaattgttgcgcttgcatggctcttatcaa
ttggatcaacttagcaatcgtgagactgagaatgggctggtagaggcagttgccattctt
atttcaaaaatgccacgcatgcgttctgaattagaagctgggagattgggtgaatgcttt
aaaacgaagcctgatttcatcaaggcatgggagaaatggcgggcacaaataactaagctg
gactgtagctcattctgggttcagtgtgatcaccgtcagaccagggacggtttgagaaat
atgctacaggtcatgctgggaaacactaacaatctctgcacttcaacatgtcattggata
gagctatatatttctcactttctttatgtcaggcctttcacagtgggtttagaaagcatg
cacgccctagcacagaaatgcattcagttgaaaccaatttccagttctcataggttgatg
gggcttattattggaattcttggagaaaatactgaggtcgtgttagcagaatgctctaga
gcatttggcccctggatggttgctcatgccattgagttgttgactgctgggagtgatcaa
gcagaaattatcttacaggaagagcgtgacaacctagggggaatcagtatagaggagctc
caccgactcgtctatgctcaagtcttgtcgtctcatgcattaacttggcaaattgctcca
atttatttgacctcatgcatgaagcaaggaatgggtttattggaagttttattgtacaag
caacctgttcaagataatcaaatgctccttaagactacagaaatttgccgtctgtatgat
cttgaaagtatcagttcaagcattatgaagattgctggagtgtatcactggaagcatggt
aggaaaggttctggagtattctggcttcaacaagctcgggatgaatttcgtctgaacaga
attgctcagcagttgtttgattttgttggaaggtcaatctctgatgaaagttttaagcaa
tgggaaggattaattgaattgctaggttctgaatctaagatcgctggggggctcgatttt
ctgcacaagtacagggatttcaaaaaatctcttcagcaggttcaagttggaaagacaact
gatgctgctcagcaagctgttgaatcccttatatcgcttatgagaaacccttctacacct
caacgcttttggctgcctcttctgcatgactcgttgaagttgcttagttggcaagagcgt
cctttgctgaatgttaatcaaaccaacctgttgctgaataaactgcaagagttatctatg
gcaaggctgcgcccagacttcattgaagctaacttgccaccacaggccttaagctctgtc
aggctagctcttgccacaaatctcggccgggctatccttgaggaatga
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