KEGG   Vitis riparia (riverbank grape): 117913692
Entry
117913692         CDS       T07274                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
vri  Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:vri00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vri03400]
    117913692
Enzymes [BR:vri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     117913692
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    117913692
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc LAMTOR HHH_5
Other DBs
NCBI-GeneID: 117913692
NCBI-ProteinID: XP_034684638
LinkDB
Position
4:complement(3431782..3475165)
AA seq 2187 aa
MASDSPRIRIDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTSPDDN
STARGSSAGKGPVKRILTLEINLPSKDENEIALLSGQFGETHTENSRGLSQMGGVGAGEQ
LKDCSVSAHGPVNSELKQFSADFLSLYCSEFPSSASLPSGLKVNVNKRCGSPSLQDVKNE
ISKKRHCIANADHSRLEGEDSCLNEKNYEDGQLGLIVKPVETIFDSSREVTVGNDATEVQ
GSLRKSNETLKSTVNMTECYTPGPLTVNAFAHETPNSMRGSSMFSPGESFWNEAIQVADG
LFAPKTDEQINAAKSEYEIKNSCNLRNAGCGFKLKEMLVDGDRTVEGMEIGVSSGSLGYR
VKDSDQVSPLPVKRFDFLFEEKNLDETNPPHCSAGKLDVIDGEQSACGSVNHKVLKTTSI
VIDYCKAQTNGGMSEVKDMNSIDAEAKREVDLLSQEKDNIKADSPDLGIAKSIIARECDE
ASTPSSFEPLKNSLDLSKWLPSEICNIYRKKGISKLYSWQVDCLKVDGVLQKRNLVYCAS
TSAGKSFVAEILMLRRVISTGKMALLVLPYVSICAEKAEHLEVLLEPLGKHVSSYYGNQG
GGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDQNRGYLLELLLTK
LRYAAGEGHVESVSGESSNMSSGKSDPAHGLQIVGMSATMPNVAAVADWLQAALYQTDFR
PVPLEEYIKVGNTIYDKKMDIIRTISKTADLGGKDPDHIVELCNEVVQEGHSVLLFCSSR
KGCEFTARHVSKFLKKFSTNAHNDTGEFVDISSAIDALRRSPAGLDPILEETLPSGVAYH
HAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYKQ
MAGRAGRTGIDTKGESVLICKPEEVKRICGLLNESCPPLYSCLSEDKNGMTHAILEVVAS
GIVQTANDINRYVRCTLLNSTKPFQDVVKSAQDSLRWLCHRKFLEWNEDTKLYSTTPLGR
AAFGSSLCPEESLVVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELFYERFMQLS
ALDQSVGNRVGVVEPFLMRMAHGAPMRASNKSRNNGKGLHDKFDNRLGITKCSLLSDEQT
LRVCKRFYVALILSKLVQEVPVTEVCEAFKVARGMVQGLQENAGRFASMVSLFCERLGWN
DLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASIPEIVKA
LFEFSSWAAEGNSVQRNVQLGVAKKIKNAARKIVLDKAEEARIAAFSAFKSLGLNVPQFS
RPLLLIANDNPSQEAASTSSGEGATSSFVGTECMKSGKPAVEGSENSNKVASEIGVEKLK
NMSDVILGTAGEVKSTGPIQCKFGAENPAVLSILNDELNSIVDRNENAVMPLSIKSMNTG
NGNGTLDAYVDHGQHEQQRGENECLDNNGKAYEKGPIHATNTPGGFDSFLDLWDSVREFY
FDIHFNKRSEVNSLAPYEIHGIAICWENSPVYYINLPKDLLCSDERKNNYLTMNVSDDKP
NILDANHRLEAAKWRWSKVGKIMGKKDVRKFTWNLKVQIQVLKNPAVSIQKFGSLNLAMR
TMGLELIDNSYLMLSPVYIVDGLDMCIVTWILWPDEERSSNPNLEKEVRKRLSSEAAAAA
NRSGRWKNQTRRAAHNGCCRRVAQTRALCSVLWKLLVSEELVEVVLRIEIPLVTILADME
VWGIGVDMEGCIQARNVLGKKLRHLEKEAYELAGMTFSLYTAADIANVLYGHLKLPIPEG
HKKGKQHPSTDKHCLDLLRHEHPIIPVIKEHRTLAKLLNCTLGSICSLARLSLQTQRYTL
HGHWLQTSTATGRLSMEEPNLQCVEHVVEFKMIKGNKDVCNSEADHYKINARDFFVPSQE
NWLLLTADYSQIELRLMAHFSRDSSLTELLSKPHGDVFTMIAAKWTGKPESVVGCQEREQ
TKRLVYGILYGMGANTLAKQLECSLGEAEEKIRSFRSSFPGVASWLHEAVACCCKKGYVK
TLKGRKRFLSKIKFGTSKEKLKARRQAVNSICQGSAADIIKIAMINIHSVIAEGVDEPNS
STELPAKFHMLKGRCRIILQVHDELVLEVDPSVMKEAGLLLKMTMENSTSLLVPLLVKLK
VGRTWGSLEPFHAEPLGDEMLVLQKDV
NT seq 6564 nt   +upstreamnt  +downstreamnt
atggcctctgattcgcctcggattcgcatcgatcagtttttttcttcaaagaaaaggaaa
ccgctatctcctggtttgaagactggaagaatcgaaaaagattcaaaaagagcagtcgat
ggttctcccagtagcaagggcaccttagacaactatttggtaacttctccggatgataat
tccactgctcgtggttcatcagcaggaaaaggcccagttaaaagaattttgacattggag
attaatttgccttctaaagatgaaaatgaaattgcccttttatcaggccaatttggagaa
actcatacagaaaattcccggggtttatctcagatgggtggtgttggagctggagagcaa
ttgaaggattgctcagtctctgcacatggtcccgtgaactcggaacttaagcaattttca
gctgactttttatctctttattgcagtgaatttccatcaagtgcaagtttgccatctgga
ttgaaagtgaatgtgaataaaagatgtggcagtccgtctctgcaagatgtgaagaatgag
atttccaagaagaggcattgcattgccaatgcagaccattcccggttagaaggtgaagat
tcttgtttaaacgagaagaattatgaagatgggcagcttggtcttattgttaaacctgtg
gaaacaatttttgattcttctagagaggtaacagttggaaatgatgccactgaagttcaa
ggaagcttgagaaaaagcaatgaaacactaaaatcaactgttaatatgaccgagtgctat
acacctggtcctttgactgttaatgcatttgctcatgaaacccccaattcaatgcgtgga
agctccatgttttcacctggagaatcattctggaatgaagcaattcaagttgctgatggt
ttgtttgctccaaaaactgatgagcaaattaatgctgccaagagcgaatatgagattaag
aactcatgcaatttgagaaatgctggctgtgggtttaagttgaaggaaatgttggttgac
ggtgaccgtacagttgagggtatggaaataggtgtttcttctggatcattaggatatcgt
gtgaaagattcagatcaagtatccccactgcctgttaaacgatttgacttcttgtttgag
gaaaagaacttggatgaaacaaatccacctcattgttctgctggtaagctggatgttata
gatggtgaacaatctgcttgtggttccgtgaatcataaggttctaaaaaccactagtatt
gtaattgattactgcaaagctcagacaaatggaggaatgagtgaagtaaaagatatgaat
tcaattgatgcagaagccaaaagggaagtggatttattgagtcaagaaaaggataacatc
aaagctgattcaccagatttgggaatcgctaaatccattattgcccgtgaatgtgatgaa
gcaagtactccatcaagttttgagcccctgaagaatagtttagatcttagcaaatggctt
ccttctgagatatgcaacatatatagaaagaaaggaatttcaaaactgtactcttggcag
gttgactgccttaaggtggatggcgtcttgcagaaaaggaaccttgtgtattgtgcatct
acaagtgctggcaaaagttttgttgctgaaattttaatgttgcgacgagtaatatcaacg
ggaaaaatggcacttcttgtacttccatatgtttcaatttgtgcagaaaaggcagagcat
ctggaagtcctcctggaaccacttggtaagcatgtcagtagttactatggaaatcaaggt
ggtggaacacttcctaaagacacttctgtagctgtctgcacaattgagaaggcaaactct
ttaatcaacagattgctggaagagggtcgcctgtcagaaattggaattattgtaatagat
gaattgcacatggttggcgaccagaataggggttatcttttggaacttctgttgacaaag
cttcgttatgctgctggtgaaggacatgttgaatcagttagtggtgagagttcaaatatg
agcagtggcaaatctgatcctgctcatggtctgcaaattgttgggatgagtgcaaccatg
cctaatgtagcagcggttgctgattggcttcaagcagcattgtaccaaacagatttccga
ccagttccattggaggaatacattaaagttggtaacaccatttatgacaagaaaatggat
attattaggacaatatcgaaaacagctgatcttggtggtaaagatcctgatcatattgtg
gaattgtgcaatgaggttgttcaggagggtcattcagtgctactattttgctctagtaga
aaaggatgtgaatttactgcaaggcatgtttcaaaattcctcaaaaaattctctaccaat
gcccataacgatactggtgagtttgttgatattagttcagctattgatgccttacggaga
tctcctgcgggactggatcctatactggaagaaactctcccttctggtgttgcctatcac
catgctggcctcacggttgaggaaagagagattgtcgagacatgctatcgcaaagggctc
ctacgtgtcttaactgctacatctaccttagctgctggtgttaacctccctgctaggagg
gtcattttccgacaaccaaggattggtcgtgattttattgatggaactaggtacaaacag
atggctggacgggctggacgaactggaatagatacaaaaggggaaagtgtactgatttgc
aaacctgaggaggtcaaaagaatttgtggacttctcaatgagagttgtccaccattgtat
tcttgtctctctgaagataagaatggaatgactcatgcaatcttggaagttgtggctagc
ggaattgttcaaactgctaatgatattaatcgatatgttaggtgcactcttcttaattcc
accaagccatttcaagatgtggttaaatcagcacaggattctcttaggtggttatgccac
agaaaatttcttgaatggaatgaagatactaagttatacagcaccactcctcttggacgg
gcagcttttggcagttctctctgtcctgaagaatcgcttgttgtgctggatgatctttca
agggcacgagaaggatttgttcttgcatctgatttgcatctagtttacttagtgacaccc
attaatgttgatgttgagccagattgggaattgttctatgaaaggttcatgcaattgtct
gctcttgaccagtcagttggcaatcgagttggagtggtggaaccatttttgatgcgcatg
gcccatggtgcacctatgcgtgcttcaaacaaatcaagaaataatggaaaagggttgcat
gacaaatttgacaaccgacttgggatcacaaaatgtagtttgctctcagatgagcaaaca
cttcgtgtttgtaagcgattttatgttgctctcatcttgtcaaaactagtgcaggaagta
ccggtgactgaggtttgcgaagcttttaaagtggctagaggcatggttcaaggcttgcaa
gagaatgctggaaggtttgcgtctatggtttctttgttttgtgaaaggcttggctggaat
gatttggaaggcttggttgctaagttccaaaatcgtgtttcatttggagtgagagcagag
atcgtagagcttactaccattccatatgttaagggttctcgagcaagagcactttataaa
gctggcttgcgtacacctctagcaattgcagaagcatcaatacctgagatagtgaaagct
ctgtttgaattttcatcatgggctgcagaaggaaattcagtgcaacgaaatgtacaattg
ggagtagccaagaagattaagaatgctgcacgcaaaattgtgcttgataaagctgaagaa
gcaaggattgctgctttctcagctttcaaatcacttgggcttaatgttccacagttttca
cgtcctttgttgttaattgctaatgacaatcctagccaagaagctgcaagtacctcttct
ggggagggtgctactagtagctttgttggtacagaatgcatgaaatcaggtaagccagct
gtagaaggaagtgagaattctaataaagttgcttcagaaattggagtggagaagttaaaa
aatatgtcagatgttatcttgggaactgcaggggaggtaaaatcaactggccccatacag
tgtaaatttggtgctgaaaatcctgcagtactgtcaattctcaatgatgaacttaacagc
attgtggatcgtaatgaaaatgcagtgatgccactttctattaagtcaatgaatactggt
aatggaaatgggacattggatgcatatgtggatcatggtcagcatgagcagcaaagagga
gaaaatgaatgtcttgacaataatggcaaagcctatgagaagggtcctattcatgcaact
aatactcctggtgggtttgattctttcttagatctctgggatagtgtgagagaattctat
tttgatattcacttcaacaaacggtctgaagtaaattctcttgcaccctatgaaatacat
ggcatagcaatctgttgggaaaattctcctgtgtattatatcaatcttcctaaggatcta
ctttgctctgatgaaaggaaaaataattacttaaccatgaatgtatctgatgacaagcca
aacattttagatgcaaatcataggttggaagcagctaaatggcgatggagcaaggttggt
aagataatggggaaaaaggatgtcaggaaatttacttggaatttgaaagttcagattcag
gtgctaaaaaatcctgcagtttccattcaaaaatttggtagtctgaatcttgcaatgaga
actatgggacttgaacttatagacaactcctaccttatgttgtccccagtttatattgtg
gatggactagacatgtgtattgtaacatggatcctttggcctgatgaagagagaagctcc
aatccaaatctggagaaggaagttaggaaaaggttatccagtgaggcagcagcagctgct
aatcggagcggaaggtggaaaaatcagactcgaagagctgcccataatggttgctgccgt
cgcgttgcacaaacacgtgccctatgttccgttctatggaaattgctggtttctgaagaa
cttgttgaagtggttttgagaattgaaatcccattggttacgattcttgcggacatggaa
gtctggggaataggtgttgatatggagggatgcattcaggcacgaaatgtgctgggaaag
aagctaaggcatcttgaaaaggaagcttatgagttggctggcatgacattttcattgtat
acagcagcagatattgctaatgttctctatggacacttgaagttgcccataccagagggg
cacaagaaagggaagcaacatccaagtactgataagcattgcttagatttgttaaggcat
gaacatcctattattccagtcattaaagaacaccggacactggcaaaactcttaaactgt
acattgggttcaatttgttctctggctaggctttctttgcagacgcaaagatacaccctg
catggccattggctccaaacatcaacagcgactggacgcctttcaatggaagaacctaac
cttcagtgtgttgagcatgtggttgagttcaaaatgatcaaaggcaacaaagatgtatgc
aattctgaagctgaccattacaaaattaatgctcgtgacttcttcgttccttctcaggag
aactggttactgttaacagcggattattcccagattgaactgcggctaatggctcatttt
tctagggactcttcattaactgaactccttagcaagccccatggtgatgtctttaccatg
attgcagcaaaatggactgggaagccagaatctgttgttggctgccaggagcgagaacag
accaaaaggttggtctatggcattctttatggaatgggtgctaatacccttgccaaacag
ctagaatgtagcttaggtgaagcagaagaaaaaattcgaagttttagaagttcttttcct
ggtgttgcttcctggcttcatgaagcagttgcatgttgctgtaagaaaggatatgtgaag
acacttaagggaagaaagcgcttcttgtcaaaaataaaatttgggactagtaaagaaaaa
ttgaaagctcggaggcaagctgtgaattccatttgtcagggatccgctgccgacataatc
aagattgcaatgataaatattcattctgtgattgctgaaggagtggatgagcctaattct
agcacagaacttccagcaaaatttcacatgctgaaggggcgttgccggataattctacag
gttcatgatgaactagtacttgaagttgatccttctgttatgaaggaagctggattgttg
ttaaaaatgaccatggaaaattctacctcactgctggtccctttgcttgtgaagctaaag
gttggaagaacatggggttctttggagcctttccatgctgaaccacttggagatgaaatg
cttgttctgcaaaaagatgtttga

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