Vitis riparia (riverbank grape): 117913754
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Entry
117913754 CDS
T07274
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117913754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117913754
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117913754
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
MPM1
Motif
Other DBs
NCBI-GeneID:
117913754
NCBI-ProteinID:
XP_034684669
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All DBs
Position
5:6389770..6396450
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AA seq
259 aa
AA seq
DB search
MEPTPRHSCLKLQIPNQSEPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVRERAAQWD
QPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLEWRWKCGLSPDSRS
TTAGVLDFLMDANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESVIYAKFL
GVLNSKKAKLRELRDQISKEETTGKLLQEEDESTDKTLSFDDESDDEAIEEESSKNLTGT
SKHVSTSRPRSQKRAAPRN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggagccgacacccagacactcatgcctgaagcttcaaattcctaaccaatcggaaccc
atcttcatcaaggccacctggtttccttcccatttccacctctctatcaccgacggcctc
cacgcctggctctgtaacgcatcggaagacgaggtccgagagcgagccgcccagtgggat
caacccgtttctgattacatcgccttggcagagcggttcctagggtttcagcagcccggt
tcggtttacgggttctccgacgccggtgacggccacagaagattgtcatggacatttgag
aaggaagggactaagctagaatggcggtggaaatgtggactctcacctgactctaggagc
actaccgccggagtcctggattttcttatggatgctaacattcgactaagtgaggaagtt
gttattaagacccaatcatttgagaggctgaaagtggaagctgaaaaatgtttagcacaa
agtgagaaattcaacaatgagaaggcggaatttgagtctgtgatctatgcaaagtttctc
ggggtcttaaattcaaagaaagccaaactcagagagcttcgagaccagatatcaaaagaa
gaaaccactggaaaattgctgcaagaagaggatgagtccactgacaaaactttgagtttt
gacgatgaaagtgatgatgaagcaatcgaggaagaatcctcaaagaatcttacaggcact
tcaaagcatgtttctacaagtaggcctcgcagtcaaaagagagctgcgcccaggaactga
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