Vitis riparia (riverbank grape): 117913927
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Entry
117913927 CDS
T07274
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117913927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vri03400
]
117913927
DNA repair and recombination proteins [BR:
vri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
117913927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
117913927
NCBI-ProteinID:
XP_034684939
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All DBs
Position
5:208041..217347
Genome browser
AA seq
1423 aa
AA seq
DB search
MVIPTEEEAPSTRAPSPPQLTDDDIVRLAREHPQTSASLPSYLLSSTSHPTLISYLHSRA
AAASPSLAVADYTFSLLSLISLSPHSPPLSTLFSSLLLAYIKLFNSRQIPHDRNSLKTIQ
IFYLHLEIAPNHDLLAVADAIVFDLLQIVNQDDAQLLDLLPRCLDLIRNSEEIERGGDFV
NSVVDHVLTSDWSKALLVKVVSLLREFSYLDKGRCREFLEKVFVGMKGVDLQDLPSLVYQ
LLVLASKGFSKREVIEGIVMFFGSKMGSKATSIVRQVEGTVLLHVNFAVKQDPSLGQEVL
GLVRSDLRVFNNFTVAILFSLARVRRFSESSMGILKAALIMAYRDFKSAEDCKWLPNDLK
EGYLQTIKIVEKAVLRAVNDSNYGREHIVPSIVQLGFILLESAEDRNQKAFYNSNGLMGA
EELGIQMLKSLFDVHEMARNEIIEQCKFRILSLKPEQSMPIIRLLGYLIQSLPYPMLEHV
SRLKEFLDYFTFMHGKIAICFVTALLPLIKFSRDLQDYTILVVRKAMFRREDTVRIAAIN
AIIDLVLAEKQSKRDGPYSFQDSSSQASSSQQAEIPCSLGAGLFQELSGLLQRCLCQQAK
VKEIMYHGLVKLVLVDPLTAGPVLDFLLPHFLHFYREQDADAQLGISCCVKSESGKVCIE
EPLDCLLSSISWILLLQPPGKTDRPSDSSWACFGFSLSQENEAGKILSSESFTSALLKIR
QCLRRGNMEDIFGQTQDTVSRTSEDEKSRCCALILSGIVEVLLNTIATEMEKATDIEKVD
LLKELIDFVNHYDFLKKSRSTSRQRNGIKRGNLRTAVHDIPDNTDLGHMTLSQARIPFLA
TSSIYQLLQTFLDLYNIDFSNGITTSQNCSQSSSGKTLVCTSKMISFVLNVSLHQIKSFT
VLGKDDPLKTLIYGEIEMLGPPLLKLIWLLKSEPKLEADQKKKEGKGRKDVEDRKEHLHL
ALVCLKELIKICLQNPHQTSLLEDLVSLSTVEYPLRNVADVGSDDECEIASGTDDQNIKS
KVLLIKRCVRPLFSELLGLSFLREVEILCDIVMMIGNKLPCKWRNFHGAWAVRICNTSGI
TNSKVAKNLVDLAICLSSPPDDLIVGQEMAKELLKVMGSESSNPMETSETYAIINHSTTS
AVASSILEFIESVIVDMDWATAKLKTFSPVTLETASSLDLNGGHAPALSLEETLYSRAEA
LVRVLSSFVLMNMKDPQAEHLLRLITRFYKHLARMSKLRIAPKGCRQLLPGLKFQKLVEL
TCRQLTVPLYSFVALMQRDQQENAKSRGLLSKIKRENRCIPDLIFQIEDYEKYLIQLSKA
TKVNLLRHAKRSTSRDFKILDHPRTNTGEEEPPNHNHSTAVQNETGQECEDNEGNGSERA
PSPEPHSPLAAEDSESDGEDRDALPNPKRSKMSKVVQDSDDEA
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggtgataccaaccgaagaagaggctccgtcaacgagggcgccttcacctccgcagctc
accgacgacgatattgtgcgcttggcacgcgaacaccctcaaacctccgcgtccctccca
tcctacctcctatcttcgacctcccaccctaccctcatctcctatctccactcacgcgcc
gccgctgcctctccctcactcgccgtcgctgactacactttctcacttctctccctcatt
tctctctctcctcattcccctcctctctccactctgttctcatcgctcctccttgcctac
atcaaactcttcaattcccgccaaatccctcacgatcgcaattctctgaaaaccatccaa
atcttctatctccacctcgaaatcgcacccaatcacgatcttctagctgtcgcagacgct
atcgtcttcgatttgctccaaattgtcaatcaagatgatgctcaactcctcgatctcctt
cctcgatgtctcgacctgattcggaattcggaagagatcgaacgaggtggcgattttgtg
aattccgtggttgatcatgttcttacgagtgattggtccaaggctttgcttgtgaaggtg
gtttcacttcttcgggaattttcgtatctggataagggtaggtgtagggagtttttggag
aaggtatttgttggaatgaagggagtggatttgcaggacttgccgtcgctagtttatcag
ttactcgttttagcatctaaggggtttagtaagagggaagtgattgaagggattgtaatg
tttttcgggtcaaaaatggggtcaaaggcaacttctattgttcggcaggttgaagggact
gtgttgcttcatgtgaattttgctgtcaagcaggatccttcgttggggcaagaggttctg
ggcctagtcaggtcagatcttagggtttttaataattttactgttgccattttgttttcc
ctggcaagggttcggaggtttagtgagagttccatggggattttgaaggctgccctgatc
atggcatatcgggacttcaagtctgcagaggactgtaaatggctaccaaatgatttgaag
gaaggatatctgcagactatcaaaatcgtagagaaggctgttctgcgagctgttaatgat
agcaactatggaagggagcatattgtgcccagtattgtacagttaggtttcatattgctg
gagtcagcagaagatagaaaccaaaaagcattctacaattccaatggtctgatgggtgca
gaagaacttggtattcagatgctgaaaagtttgtttgatgtccatgagatggcaagaaat
gagattattgaacaatgcaaatttcgtatcctctctttgaagcctgaacagagcatgcca
atcataagactgctgggttatctgattcagagtttaccctacccaatgctggaacatgtt
tcacgtctaaaggaatttttggattatttcacatttatgcatggcaagatagccatctgt
tttgttactgctctgttgcctctcatcaaatttagtcgagatcttcaggattacaccata
ttggttgtgcgcaaggctatgtttagacgagaagatacagttcgtattgcagcaataaat
gccattattgatctggttttggcggaaaaacaatccaaaagagatgggccatattctttc
caggactcttcaagccaagccagtagcagccagcaagcagagataccctgcagcttgggg
gctggtctatttcaagagttgagtggtttgctgcagagatgtctttgtcagcaggcaaaa
gtcaaagagatcatgtaccatgggcttgtaaagcttgtcttggtggatccactaactgct
gggcctgtcttggattttctcttgcctcactttcttcatttttacagggagcaggatgca
gatgctcaacttggcattagctgttgtgttaaatcagaaagtgggaaagtttgtattgaa
gaacctttagattgtctcctatcctctatctcttggattctcctccttcagccacctggt
aaaactgatcgcccctcagattcatcatgggcatgttttggtttctctctttcacaggag
aatgaggctggaaaaattctgtccagtgagtcattcactagtgctttattgaagatccgc
cagtgtttgagaagaggaaatatggaagacatttttggtcagacccaggatacagtctct
agaacatctgaagacgagaagagcagatgctgtgctttgattttgtcaggaattgttgag
gttttgttgaatactattgctactgagatggagaaagcgactgacatagaaaaggtagat
ctactaaaggagcttattgattttgttaatcattatgattttttgaaaaaaagtaggtct
acgtcaaggcagcggaatggtatcaaaagagggaatctaagaactgcggttcatgatata
ccagataacactgatttgggccacatgacattgtcccaagcacgaatacctttcctggca
acttcaagtatctaccagctactgcaaacatttctggacctttataatattgatttctca
aatggtattacaacttctcagaactgtagccaatcatcctcaggcaaaactttagtttgc
acttcaaaaatgatttcctttgtcttaaacgtttctctccatcaaatcaaatctttcacc
gttttgggaaaagatgatccattaaagactttgatctatggagaaatcgagatgctgggt
cctcctttgctgaaattgatttggttactcaaatcagagcctaagttggaggcagatcaa
aagaagaaagaaggtaaggggaggaaagatgttgaggacagaaaggaacacttgcatctg
gccttagtttgcttgaaggaattgataaaaatttgcttgcagaacccacaccagaccagc
ttgcttgaagatttagtgtctttgtctacagttgagtatccactgagaaatgtggctgat
gttgggtccgatgatgaatgtgaaatagcctctgggactgatgatcaaaacataaaaagc
aaagtattgcttataaaaagatgcgtaaggccattgttctctgagcttcttgggctttca
tttctccgtgaggttgagattctatgtgatatagtaatgatgattggtaacaagctgccc
tgcaaatggaggaactttcatggagcctgggctgttcgtatttgcaacaccagtggtatt
acaaattccaaggttgcaaaaaatttggttgaccttgctatatgtttaagctcacctcca
gatgatctaattgtgggtcaagaaatggcgaaggagctgttaaaagttatgggatcagag
agtagcaatccaatggagacatctgaaacatatgctatcataaatcattcaacaaccagt
gcagtagcttcttctatactggagtttattgaatcagtaatagttgatatggattgggct
acagcaaagttgaagacattctctccagttactctagaaactgcttcttcccttgatttg
aatggaggacatgctccggcattgtctttggaagaaactctctactcaagagctgaagcg
ctggttagagtcttatcttcttttgttttaatgaacatgaaggaccctcaagcagagcat
ttgcttagattgattacaaggttttacaagcatttagctcgaatgtcgaagcttcggatt
gctcctaaaggctgcaggcaacttttacctggccttaagttccagaagcttgtggaacta
acatgcaggcagctgactgttcctctatatagctttgtggcactgatgcaaagggatcaa
caagagaatgcaaagagcagaggactactcagcaagattaagagggagaacagatgcatc
ccagacctgatcttccagatagaagattatgaaaagtatctcatccagctcagcaaggct
accaaagtcaatctattgaggcacgctaagcgtagcacttccagagatttcaaaatatta
gaccaccccagaaccaacaccggggaagaagagcctccaaaccacaatcattcaactgca
gttcagaatgaaacaggccaggaatgtgaagataatgaaggaaatggatcagagagggct
ccatcacctgaaccccacagtcccttggctgctgaggattctgaatctgatggtgaagat
agagatgctcttcccaaccccaagagatcgaagatgagtaaggttgtgcaggactcagac
gatgaagcatag
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integrated database retrieval system
