Vitis riparia (riverbank grape): 117913929
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Entry
117913929 CDS
T07274
Name
(RefSeq) LOW QUALITY PROTEIN: 15-cis-zeta-carotene isomerase, chloroplastic-like
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00906
Carotenoid biosynthesis
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
117913929
Enzymes [BR:
vri01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
117913929
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Motif
Pfam:
NnrU
ICMT
PEMT
Ac45-VOA1_TM
Motif
Other DBs
NCBI-GeneID:
117913929
NCBI-ProteinID:
XP_034684943
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Position
5:19333669..19338161
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AA seq
366 aa
AA seq
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MATSLLLSSSFLSSSPLSQPRRLTSNVPTSCFPYARTSAKLFLKSTHVPSCSFRFCHKIM
AGTSIGETEEEGVEPVTVGEDSAAFDLGQQKISSWIYFGGIXGVVLFLLDVVWIDNSTGF
GKDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERAFRVLFAGTSLPL
AVSTIVYFINHRYDGLQLWQLQSVPGIHQLVWLSSFVSFFFLYPSTFNLLEVAAVDKPKM
HLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLFGVWNGDRRLASR
YGEAFDTVQRRTSIIPFAAILDGRQKLPKDYYKEFLRLPYLSITMLTLGAYLAHPLMQAA
SFRLHW
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttctctcctcctctccagctccttcctttcctcctctcccctttcccaaccc
agaagactcacctccaatgttcccacatcatgttttccctatgcaagaacttctgcaaag
ctatttctgaaatctactcatgttccttcatgttcattcaggttttgtcacaaaattatg
gcggggacttcaataggggagacagaggaagagggtgtggagccggtcactgtgggtgag
gactctgcggcctttgatttgggtcagcagaagatttcttcctggatttatttcggtggg
attnttggggtggtcctgtttcttcttgatgtggtttggattgataactccactgggttt
ggcaaggattttattgctgccgttgccggggtttcggagagccatgaggttgtaatgttg
atccttactctcatttttgccattggccacagtggcttggctagtcttcgagatagtggt
gagaaactcattggagaacgtgctttccgtgttctatttgcagggacatctcttccattg
gctgttagtacaattgtgtacttcatcaaccacagatatgatggactgcagttatggcaa
ctccagagtgttccaggaatacatcaacttgtgtggttatcttcctttgtttccttcttt
ttcctctatccttcaacctttaatctattagaggtggcagctgttgacaagcctaagatg
catctttgggaaactgggatcatgagaatcaccagacacccccagatggtcggacaagtg
atctggtgcatagctcacacagtctggatagggaactctgtagcagttgcagcctctatt
ggcttaattggacaccatctatttggggtttggaatggagacagaaggctggcttcacga
tatggggaggctttcgacactgtgcagagaagaacaagcattattcccttcgcagctatc
cttgatggacgacaaaagttgcccaaagattactacaaagaattcctgcggttgccatat
ttatcaatcaccatgctgacactaggtgcgtatctagctcacccccttatgcaggcagct
agttttcggcttcattggtag
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