KEGG   Vitis riparia (riverbank grape): 117914116
Entry
117914116         CDS       T07274                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03020  RNA polymerase
vri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117914116
  09124 Replication and repair
   03420 Nucleotide excision repair
    117914116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vri03021]
    117914116
   03400 DNA repair and recombination proteins [BR:vri03400]
    117914116
Transcription machinery [BR:vri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117914116
  RNA polymerase III system
   RNA polymerase III
     117914116
  RNA polymerase I system
   RNA polymerase I
     117914116
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117914116
SSDB
Motif
Pfam: RNA_pol_Rpb8 DUF6044 Zona_CL1
Other DBs
NCBI-GeneID: 117914116
NCBI-ProteinID: XP_034685206
LinkDB
Position
5:23223135..23227277
AA seq 145 aa
MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL
APTLHLDGADVTDYFTQGERKSLADKFDYVMYGIIYKVSNEGSGPDVKGVIYASFGGLLM
ILKGDPSNLNKLEVNKRLFLLMKKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggttgaaacattttttgatgatatttttgtggttgacggacaagatccaggtggtaaa
aaatttgataaagtttctcgtattgaagcatcgagtgagcagtatgacatgttcatgcaa
ctagatgtgaacatagaggcatatcctattcaggctggggagaaattcagaatggtgtta
gctcccactctgcatttggatggagcagatgtcactgactattttactcagggtgagcgg
aagtcacttgcagacaaatttgattatgtcatgtatgggataatatataaagtctcaaat
gaaggttcaggacctgatgttaaaggggtgatatatgcctcatttggtggccttctgatg
attctcaaaggtgacccctccaatttgaataaattagaagtcaataaaaggttatttctt
ctcatgaagaaggtatga

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