Vitis riparia (riverbank grape): 117914286 Help Entry 117914286         CDS       T07274                                  Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism vri  Vitis riparia (riverbank grape) Pathway vri03440   Homologous recombination vri03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:vri00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     117914286    03450 Non-homologous end-joining     117914286  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:vri03032]     117914286    03400 DNA repair and recombination proteins [BR:vri03400]     117914286 DNA replication proteins [BR:vri03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     117914286 DNA repair and recombination proteins [BR:vri03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      117914286     BRCA1-C complex      117914286    NHEJ (non-homologous end-joining)     MRX complex      117914286 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 SMC_N AAA_21 AAA_15 Rad50_zn_hook SbcC_Walker_B OVT1 AAA_29 ABC_tran AAA_16 AAA_22 Motif Other DBs NCBI-GeneID:  117914286 NCBI-ProteinID:  XP_034685439 LinkDB All DBs Position 5:14646587..14743696 Genome browser AA seq 1316 aa AA seqDB search MSTVDKMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI FSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQILKDAAYKLRESIEQDQEKTESLKI QMQELENNIQNVDAKIQHTEATLKDLRKLQDQISTKTAERSTLFKEQQKQYAALAEENED TDEELNEWKTKFEERIALLESKISKLEREMDDTETKGSFLKQTINDYIWETSKLQTEAEV HSSLKNERDSTIQKLFARNNLGSLPSVPFSNEIALNFTNRIKTRLMDLEKDLQDKKKSIE MELKVAWDRYMDANDHWKDIEAQKQAKVEIKSGILKRIEERENERDSFELQISNVSLSHI DEREKNLRIEVERKTNQLAEREFESNIRQKQSELYSIEQKIKALNREKDIMAVDSEDRVK LSLKKGELENHKKKHRKIMDEYKDRIRGVLKGRLPPDKDLKKEITQALRALGIEFDDLNS KSREAEKEVNMLQMKVEEVNNNLSKLNKDMDSRKRFIESKLQSLDQQSFSIESYMKAFDW AKEKRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAAS SAEHMKVLAVESSSAESLFLQLDKLRMVYEEYVKIGKETIPLAEKNLNELTEELDQKSQA LDDVLGVLAQVKTDKDSVEALMQPVETADRLFQEIQTWQKQVDDLEYKLDFRGQGVRSME EIQLELNTLQNTKDNLHNDLEKLRDEQRYMENDLSNIQIRWHTTREEKVKAANTLRDVKK AEEELDRLVEEKSQVDLDEKHLAEALGPLSKEKEKLLSDYNDLKAKLDFEYEQQAEQKRN YQQEVEALLKVTSKIKEYYDSKKGERLKELKEKKSLSESQLQSCDARKQEILTELNKSKD LMRNQDQLKRNIEDNLNYRKTKAEVDKLTIEIELLEDRILKIGGVSAVEADLGKLSQERE RLLSELNRCHGTTSVYQSNISKHKIDLKQTQYKDIDKRYCDQLIQLKTTEMANKDLDRYY NALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAGTRSYSYKVLMQT GDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALL RIMEDRKGQENFQLIVITHDERFAQLIGQRQHAEKYYRVAKDDHQHSIIEAQEIFD NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgagtacagtagataagatgctaataaagggcatccggagttttgatccggaaaacaaa cacgtcatcgccttcttcaagcccttaactctcattgttggtcctaatggcgctggcaaa accaccattatcgagtgtttgaagctttcatgtaccggagagttgcctcctaacgcaagg tctggtcacagtttcatccatgatcccaaggttgcaggggagacggaaacgaagggacag ataaagcttagattcaagacagctgctggtaaggatgtggtgtgcataaggtcgtttcag ctgacgcaaaaagcttctaagatggagtacaaggcaatcgagagtgtccttcagacaatt aatcctcacaccggagagaaagtttgccttagctatagatgtgctgacatggatcgagaa atacctgctttaatgggggtttcaaaggctgtccttgaaaatgttatatttgtgcaccaa gatgatgccaactggccactgcaagatccttcaacattaaaaaagaagtttgatgatatc ttctctgctacccggtacactaaggcgttggaggtcattaaaaagcttcacaaagatcag gctcaagaaataaagacatataagctgaagttagagaatcttcaaatcctgaaagatgca gcgtataagcttcgagaaagcattgaacaagatcaagagaaaacagagtcattaaaaatt caaatgcaggaattggaaaataacatccaaaatgtggatgccaagatacagcatactgaa gcaactttaaaagacttgcggaagctacaagaccagatatcaactaaaactgctgaaaga agcaccttgtttaaggagcagcagaaacaatatgcagctcttgctgaggagaatgaagac actgatgaagaattaaacgaatggaaaaccaagtttgaagagagaattgcactcttagaa tctaaaatcagcaagttggagagggaaatggatgacacagagacaaaaggttctttcctt aagcagacaatcaatgactatatctgggagacaagcaaacttcaaactgaagctgaagtt cattcctccttgaagaatgaaagagattcaactattcaaaaactttttgcaaggaataat ttagggtctcttcccagtgtccccttcagcaatgaaattgctttgaacttcacaaaccga ataaaaacaaggttaatggatcttgagaaggacctgcaagataaaaagaaatcaattgaa atggaacttaaggtggcgtgggatcgttacatggatgcaaatgaccattggaaagatata gaggctcaaaaacaggctaaagtagagatcaagagtggtattttgaaacgcattgaagag agggaaaatgagcgtgattcatttgaactccaaatttctaatgttagtctgtctcacatt gatgaaagagaaaaaaatttgagaattgaggttgagagaaagacaaaccagcttgctgaa cgagaatttgagtcaaacatccgtcaaaagcagagtgagttgtatagcatagagcaaaaa attaaagctcttaatcgagagaaagacatcatggctgtggattcggaggacagagtgaaa ttgtctctgaagaagggagagttggaaaaccacaaaaagaaacatcgaaagataatggac gaatacaaggacagaatcaggggagtgctgaaagggaggcttcctcctgataaggatttg aagaaggaaattacgcaagccctaagggctcttggaattgagtttgatgacttgaactca aagtcccgtgaagctgagaaggaggtgaatatgctgcagatgaaagtagaagaagttaac aataacctttccaaacttaacaaggatatggactcaaggaagagatttattgaatctaaa cttcagtcattggatcagcagtcttttagtatcgaatcttatatgaaggcctttgattgg gcgaaggagaaaagagatgtccagaaaagcaaatataacattgcagatggcatgaggcaa atgtttgatccttttgaaagagttgcccgtgctcatcatgtttgcccttgctgtgagcgt cctttctctgctgaagaggaagatgagtttgttaaaaagcaaagagtgaaggctgcaagt tcggcagagcatatgaaagtgttggctgttgagtcatccagtgccgagtcactattcctg cagttggataaacttcgtatggtatatgaagaatatgtcaaaattggcaaagaaacaatc cctcttgcagagaaaaatttaaatgagctcactgaagaattggatcagaaatctcaggcc cttgatgatgtgttgggtgttttagctcaagtgaagactgataaagactcagttgaggcc ttgatgcaacctgtggaaactgctgacaggctcttccaggaaattcaaacttggcaaaag caagttgatgacttagagtataaacttgattttcgagggcaaggtgtcagatctatggaa gaaattcagttggagctgaatactttgcagaacacaaaggataatttgcataatgatctg gagaagttaagggatgagcaaaggtacatggaaaatgatctatcaaatattcaaatacgg tggcacactacaagggaagagaaggtgaaagcagctaatacattgcgggatgttaaaaag gctgaagaagagcttgatcgtttggttgaggaaaaaagtcaagtagaccttgatgagaag catttggcagaggctcttggacctttatcgaaggagaaagagaaattactaagtgactac aatgatttgaaagcaaagcttgattttgaatatgagcaacaggctgaacaaaagagaaat tatcaacaggaagttgaggcactccttaaagttacttctaagattaaagagtattatgat tcaaagaaaggggagaggttgaaggaacttaaagaaaagaaatctttatcagagtctcaa cttcaaagttgtgatgccaggaagcaggaaattttaactgaactaaataaaagcaaagat ttgatgcggaatcaagaccaattaaagcgaaatattgaggacaatttgaattataggaag acaaaggctgaagtagataaacttaccattgagattgaattgctggaagacaggatattg aagattggtggggtttctgctgttgaagctgatcttggaaagctatcgcaagaaagagag agacttctttcagagctaaacaggtgtcatggaacaacatctgtttaccagagcaatatt tcaaaacataagattgatcttaaacaaacacagtacaaggacattgataaacggtactgt gatcagttaattcagctgaagacaactgagatggcaaacaaggaccttgacagatactac aatgcacttgacaaagcactcatgcgtttccatacaatgaaaatggaggaaataaataaa attataagagagctgtggcagcaaacatacaggggacaagatatagactacattagaatt cattcagattccgaaggtgctgggactcgatcttacagctacaaggttcttatgcagact ggtgatgcagagttagaaatgagaggaaggtgtagtgctggtcagaaggtccttgcttca ctaatcataaggttggcattggccgagactttttgccttaattgtggaatactagcattg gatgaaccaaccacaaacttagatggcccaaatgctgagagtcttgcagccgctttattg agaatcatggaggatagaaaaggacaggagaattttcaactaatagttattactcacgat gagagatttgctcagctaattggtcaacgtcagcatgcagaaaaatactatagagttgca aaggatgatcatcagcatagcataattgaagcccaggagatatttgattga

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