Vitis riparia (riverbank grape): 117914300
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Entry
117914300 CDS
T07274
Name
(RefSeq) uncharacterized RING finger protein C548.05c-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117914300
Enzymes [BR:
vri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117914300
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117914300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf-RING_4
RING_XB3-XBAT31
zf-RING_10
zf-rbx1
Rtf2
Zn_ribbon_6
zf-RING_6
zf-Nse
Sina_RING
zf-P11
LIM
DZR_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117914300
NCBI-ProteinID:
XP_034685462
LinkDB
All DBs
Position
5:complement(15516438..15532618)
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AA seq
224 aa
AA seq
DB search
MSTQDLSEQQNGSERDIEEEETLLLDLNYPPPSDNVALESTFTSSSPLELYAKDQRWSNP
QATNNVDASDDDVVILSSPRSFLEARKNSRRNAEVIMVNDDDIEMPGHLGIVFDDIEMQG
HQEIAQQNKIDTDLKLCLELFNKTECLWQTENVQIPTEVPSPETPTFTCPICMDQLTEET
STKCGHIFCKECIEGAMAVSQRCPTCRKKLKKKDIIRVYLPGKK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaagatttatcagagcaacaaaatggctcagagagggacattgaggaggaa
gagacattgctcttggacctcaattatccacctcccagtgacaatgtagctctggagagc
acctttactagttctagtcctctagaattgtatgccaaagatcaaaggtggtctaatcct
caagctacaaataatgttgatgcgagtgatgatgatgttgttattttatcctctccaagg
agtttccttgaggccagaaagaattccaggaggaatgctgaggtgataatggtgaatgat
gatgatatagaaatgccagggcacctaggtattgtttttgatgatatagaaatgcaagga
caccaagagattgctcaacagaacaaaatagataccgatttgaagctatgcttggaactc
ttcaacaaaactgagtgtttatggcagactgaaaatgttcaaatacctacagaagtgccc
tcaccagagacacccaccttcacttgcccaatttgcatggatcaattgactgaagagaca
tcaacaaagtgtggtcacatcttctgtaaggagtgcattgaaggtgcaatggcagtcagt
caaaggtgccctacttgccggaaaaaacttaaaaagaaagacatcatcagggtctacctt
ccaggcaagaaataa
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