Vitis riparia (riverbank grape): 117914327
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Entry
117914327 CDS
T07274
Name
(RefSeq) ribulose bisphosphate carboxylase large chain
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00630
Glyoxylate and dicarboxylate metabolism
vri00710
Carbon fixation by Calvin cycle
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
vri01200
Carbon metabolism
Module
vri_M00165
Reductive pentose phosphate cycle (Calvin cycle)
vri_M00532
Photorespiration
vri_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
117914327
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
117914327
Enzymes [BR:
vri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
117914327
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Oxidored_q4
Top1B_N_bact
Motif
Other DBs
NCBI-GeneID:
117914327
NCBI-ProteinID:
XP_034685518
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Position
1:664589..666771
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AA seq
436 aa
AA seq
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MKPKLVDPSSAIVVAPDSFVFATLRDFKGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEES
QFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYTKTFQGPPHGI
QVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWR
DRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFT
ANTSLAQYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKL
EGEREITLGFVDLLRDDFVEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFG
DDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIRAALIFVLIL
IVGSVYAWRKGALEWS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaagcttgttgatccttctagtgccattgtagttgcccctgactcatttgtc
tttgcaactcttagggacttcaagggtacatggacaactgtgtggactgatggacttacc
agccttgatcgttacaaaggacgatgctaccacatcgagcccgttgctggagaagaaagt
caatttattgcttatgtagcttaccctttagacctttttgaagaaggctctgttactaac
atgtttacttccattgtgggtaatgtgtttgggttcaaagctctgcgcgctctacgtcta
gaggatctgcgaatcccccctgcttatactaaaactttccaaggcccgcctcatggcatc
caagttgagagagataaattgaacaagtatggtcgtcccctattgggatgtactattaaa
cctaaattggggttatccgctaagaactatggtagagcagtttatgaatgtctccgcggt
ggacttgattttactaaagatgatgagaacgtgaactcccaaccatttatgcgttggaga
gaccgtttcttattttgtgccgaagccatttttaaatcacaggctgaaacaggtgaaatc
aaagggcattacttgaatgctactgcaggtacatgcgaagaaatgatgaaaagggctgta
tttgccagagaattgggagttcctatcgtaatgcatgactacttaacagggggattcacc
gcaaatactagcttggctcagtattgccgagataatggcctacttcttcacatccatcgt
gcaatgcatgcagttattgatagacagaagaatcatggtatgcactttcgtgtactagct
aaagccttacgtatgtctggaggagatcatattcacgccggtaccgtagtaggtaaactt
gaaggagaaagagagatcactttgggctttgttgatttattacgtgatgattttgttgaa
aaagaccgaagtcgcggtatttatttcactcaagattgggtctctctaccaggtgttctg
ccagtggcttctgggggtattcacgtttggcatatgcctgctctgaccgagatctttgga
gatgattccgtactacagttcggtggaggaactttaggacacccttggggaaatgcaccg
ggtgccgtagctaatcgagtagctcttgaagcatgtgtacaagctcgtaatgagggacgt
gatcttgctcgtgagggtaatgaaattatccgtgcagctttaattttcgtgcttatccta
attgttggttcagtttatgcatggcgaaaaggagcattggaatggtcttag
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