KEGG   Vitis riparia (riverbank grape): 117914338
Entry
117914338         CDS       T07274                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03250  Viral life cycle - HIV-1
vri03272  Virion - Hepatitis viruses
vri04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117914338
   03272 Virion - Hepatitis viruses
    117914338
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117914338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vri04131]
    117914338
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vri04147]
    117914338
Membrane trafficking [BR:vri04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    117914338
Exosome [BR:vri04147]
 Exosomal proteins
  Proteins found in most exosomes
   117914338
SSDB
Motif
Pfam: UEV Vps23_core UQ_con Nsp1_C
Other DBs
NCBI-GeneID: 117914338
NCBI-ProteinID: XP_034685528
LinkDB
Position
5:complement(16338355..16340016)
AA seq 425 aa
MGGPSPSLSPSPSPSPSPNPQLTQQWLSSVLSQRGPSALPYAEDVKWLIRQHLLSLSENY
PSLQPKTATYTHNDGRTVNLLQSDGTVPMLYLDVTYNIPIIIWLMESYPRHPPCVYVNPT
RDMVIKRPHSHVNPSGMVSIPYLHNWVYPSSNLVDLARNLSHVFSRDPPLYSQRRPNPNP
NPNPNPNPNANYNFTPNPMMGAAPTVRPVIPPRAYPPSPYGSGSGTGGGRIPPSPQRHTE
DPNEVFRRNAVNKLVESLHADVGVLRKTSEAEMEGMFGAQGVLRQREEQLSRGVKELHDE
KEGLEQQLQMVLMNADVLEAWLRENEVKLGNMGNLDVDNAFEPCDALSKQMLDCTSSDLA
IEDTIYALDKAVQEGSISFDQYSKNVRLLSREQFFHRAMCAKLRAAQMQAQVASMAARVS
SQYAM
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgggaggcccatctccatctctatctccgtctccatctccttccccttctccgaatcca
caactgacccaacagtggttgagctccgtcctctcacagcgaggcccatcagcactccca
tacgccgaagacgtcaaatggctcatccgccagcacctcctctccctctccgaaaactac
cccagcctccagccgaagaccgccacctacacccacaacgatggccgcaccgtcaacctc
cttcaatccgacggcaccgtccccatgctctaccttgatgtcacctacaacatccccatt
atcatctggctcatggagtcctatcctcgccaccccccttgcgtctacgtcaaccccact
cgcgacatggtcatcaagcgccctcactctcatgtcaacccctccggtatggtctccatc
ccctatcttcacaattgggtctacccgagctccaatctcgttgaccttgcccgcaatttg
agccacgtctttagccgcgatccccccctctactcgcagcgccgacctaatcccaatcct
aaccctaaccctaatcccaatcctaatgccaattacaattttacgcctaatcccatgatg
ggagctgctcccaccgtgcgcccggtgattccgcccagggcttatcccccgtctccctat
ggcagtggaagtggcactggtgggggccggattccgccatccccacagcggcacacggag
gaccctaacgaggtttttcggcgaaatgctgttaataagctagttgaatcgctgcatgct
gatgttggggtattgaggaagacaagcgaggcggagatggaagggatgttcggggcgcag
ggggtgttaaggcaaagggaggagcagctatcgaggggtgtaaaggaattgcatgatgag
aaggaggggctggagcagcagttgcagatggttttgatgaatgctgatgttcttgaggca
tggttgagggagaatgaggttaagttgggtaatatgggaaatcttgatgtagataatgca
tttgagccttgtgatgctctttccaagcagatgcttgactgcacttcctccgacttggct
atagaggacacaatttatgccttggataaggctgtgcaagagggatcaatatcatttgat
caatactcgaagaatgtgagattgttgtctcgtgagcagttcttccaccgggctatgtgt
gcaaaactcagggctgcacagatgcaagctcaggttgctagtatggctgctagggtgtca
tcacaatatgccatgtga

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