KEGG   Vitis riparia (riverbank grape): 117914340
Entry
117914340         CDS       T07274                                 
Name
(RefSeq) uncharacterized protein LOC117914340
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117914340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vri03041]
    117914340
Spliceosome [BR:vri03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117914340
 Complex B
    117914340
SSDB
Motif
Pfam: RRM_1 RRM_9 RBD_DEAH11
Other DBs
NCBI-GeneID: 117914340
NCBI-ProteinID: XP_034685530
LinkDB
Position
5:complement(8459142..8494023)
AA seq 940 aa
MSRSNRPKEKYGKSTELDLDNFKEGTAARTRPFSFDEIMLRRKNKKLHGDVKDGAGEEGN
ISRKDIVKNVSDCYESDKGYKHNEDSFPGAINHSSEDFVKVSSRKKDENTSMKEGNLGKL
KDKESHNSEDKLKAKPNKGMTDKSKEGKINQRVHGRKKIDERSRRSSDDSESEPENKFSR
DSVGKDRYADRSRKSEKESKRKHRTGEDEKNRERNSMKKHDPGKRHESEFLDRKERRESP
PSRYEESRPKRRRSRSRERDKDRDKRSSSLSPRAQKRTSHHGREHAELSSHSLKDRSGRQ
HSDADRNRISNNGSSSHFRRHGGSASGLGGYSPRKRRTEAAIKTPSPTNRSPEKKSAGWD
LPPARTDGMNAGSVLSSLQVLKPTVSSNADELPSAVPVAVPVTATTAKPPLPRIYSDAVS
KNKNVSIDSIQLTQATRPMRRLYVENLPVSSSEKALMECLNNFLLCSGVNHVQGTPPCIS
CIIHKEKGQALVEFLTPEDASAALSFDGISFSGSILKIRRPKDFVDMTGVQEKLVAAPDA
ISDTVKDSPHKIFIGGISRALSSDMLMEIAAAFGPLKAYRFQVNEDLGEPCAFLEYVDQS
VTLKACAGLNGMKLGGQVLTVVQAIPNALAMENTGNLPFYGIPEHAKPLLERPTQVLKLK
NVVNPDDLSSLSEAELEEILEDIRLECTRFGTVKSVNIVKYNNSHVSTLEAYEAADNTGS
NLGCDGNSMKAETLGGGTDNGSSDISGIKPPTDVKDLKEVDEVVERNGISDDKSLTHLIK
NELCEPSQIDSNTAVKEPGCPDGSDDIPRGLPDQLNNMKHEVELRNDKAADVIQEDFIIK
NKLMTVEELKLEETNRKLLGTSAELDSSPGIKSDFTGKNDSEKGLCDLDEMFEVGCVLVE
YGRTESSCMAAHCLHGRYFDDRVVVAGYVALDLYRMKFPR
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgagcagatctaatcggccaaaagagaagtatggtaaaagtacggagcttgacctagat
aatttcaaagagggaactgctgctaggacaagacctttcagctttgatgaaataatgctt
agaaggaaaaacaagaaactgcatggagatgttaaagatggagctggagaagaagggaat
atatcaaggaaagatattgtgaagaacgtttctgattgttatgaatctgacaaaggttat
aaacataatgaggattccttccctggtgccataaatcattcttcagaggattttgtgaag
gtaagttccagaaagaaggatgagaacacttccatgaaggaaggcaatttaggcaaatta
aaagataaggaaagtcataattcagaagacaaattgaaggcaaaaccaaacaaaggcatg
actgacaaatctaaagaaggaaagattaaccaaagggttcatggaaggaaaaaaattgat
gagagatcaaggcgatcaagtgatgattctgaaagtgaacctgaaaataagttttcaaga
gattcagttgggaaggatagatatgcagacagaagcagaaaatctgaaaaagaaagcaaa
aggaaacaccgaactggagaagatgagaaaaatagagaaaggaattctatgaagaaacat
gatcctggaaaacggcatgaatctgaatttctggatagaaaggaaaggagggaatcaccg
ccatctcgttatgaagaatcaaggcctaaaagaagaaggtcaaggagccgagagcgtgat
aaggatagagataaaaggtccagttctctttcaccaagggcacagaaacgtacatctcat
catgggagggagcatgcagagctttcatcgcactctcttaaagataggtcaggaagacag
cattctgatgctgacaggaatagaatatcaaataatggttcaagcagccatttccgacga
catggtgggtctgcaagtgggcttggtggctattcaccaagaaagagaagaactgaggct
gctattaagactccttccccaactaatcgctcgccagagaagaaaagtgctggttgggat
ctcccacctgctagaacagatggcatgaatgctggttcagttctttctagtttgcaggtt
ttaaaaccaactgtatcatcaaatgcagacgaactgcctagtgctgtgccagttgctgtt
ccagtcactgcaactacagcaaagccccccctccctagaatttattcggatgctgtatca
aaaaacaagaatgtctccattgactccattcaactaacacaggccacccgccctatgagg
aggctttatgtggaaaatttaccagtttcatcctctgagaaagctctaatggaatgcctt
aataactttttgctgtgttcgggtgttaaccatgtccaaggaaccccgccatgtatcagc
tgcattattcacaaagagaaaggccaagctctcgtggagtttctcacacctgaggatgct
tcagcagctctttcttttgatggcatatccttctctgggtccattctcaagattagacgc
ccaaaagactttgttgacatgactggtgttcaagagaaattagtagctgcacctgatgca
ataagtgatactgtcaaggattcacctcacaagatcttcattggtgggatttcaagggct
ctttcatctgatatgcttatggagattgctgctgcctttggtcccttgaaggcttaccgc
tttcaggttaatgaggatcttggtgagccttgtgcttttctggagtatgttgaccagtca
gttactcttaaggcttgtgcgggtctgaatggtatgaagttgggaggacaagttttaaca
gtagttcaagctattccaaatgcattggctatggaaaatactggaaacctgccattttat
gggatccccgagcatgcaaagccattacttgagaggcccacccaagttctgaagcttaaa
aatgtggtaaatccagatgacctttcatcactttctgaagcagaattggaagaaatattg
gaagacattcggttggagtgcaccaggtttggcactgttaaatctgttaacattgtcaag
tacaacaacagtcatgtaagcaccctagaagcatatgaagctgctgacaatacaggttct
aacttgggttgtgatggcaatagcatgaaggcagaaaccttaggaggaggtactgataat
ggctctagtgatattagtggcataaagcctcctactgatgtcaaagaccttaaagaagtt
gatgaagttgtggaacgtaacggcatttctgatgataaatctttgactcatcttataaag
aacgaactttgtgaaccaagtcagattgatagcaacacggctgttaaagaaccaggctgc
ccggatgggtctgatgatattcctagaggactccccgaccagcttaacaatatgaaacat
gaagtggaactccgtaatgacaaggctgctgatgttattcaagaggattttatcatcaaa
aacaaattgatgactgtcgaagagttgaagttggaggaaaccaataggaagttgttggga
acttctgctgaattggatagttccccaggaataaaatcagattttactgggaagaacgac
agtgagaaagggttgtgcgatcttgacgagatgtttgaggtaggctgtgttctggtggag
tatggaagaacagaatcctcttgcatggcagcacattgtttgcatggacgatattttgac
gaccgggttgtggttgcggggtatgttgctctcgatctttaccggatgaagtttcctaga
tga

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