Vitis riparia (riverbank grape): 117914383
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Entry
117914383 CDS
T07274
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117914383
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117914383
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vri04040
]
117914383
Protein phosphatases and associated proteins [BR:
vri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117914383
Membrane trafficking [BR:
vri04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
117914383
Ion channels [BR:
vri04040
]
Chloride channels
Chloride channel (CLC)
117914383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
117914383
NCBI-ProteinID:
XP_034685600
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All DBs
Position
5:4447924..4463695
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AA seq
800 aa
AA seq
DB search
MLSNHLQNGIETARLVWSRLPNSDDEALDEVGLSKKSDGSRSESLDYEVIENNAYREEQA
QRRKLMVGYYVGVKWFFALLIGIGTGLAAVFINISVENFAGWKFQLTFSIIQKSYVAGFL
VYILFNLLLVFSSVYIVTQFAPAAAGSGIPEIKGYLNGIDTHGILLFRTLIGKIFGSIGS
VGGGLALGKEGPLVHTGACIASLFGQGGSTKYHLSSRWLQVFKSDRDRRDLVTCGCAAGV
AAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKSGKCGHFGSGG
FIIWDISDGQEDYSFEELLPMAIIGVIGGLLGALFNQLTIYITYWRRNYLHKKGSRVKMI
EVCLVSLITSVISFGLPLLRKCSPCPEVELNSGIECPRPPGMYGNYVNFYCHKDNEYNDL
ATIFFNTQDDAIRNLFSAKTIHEYSAQSLLTFLVMFYSLAVLTFGTAVPAGQFVPGIMIG
STYGRLVGMFVVNFYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPL
IMLVLLISKAVGDAFNEGLYEEQARLRGIPLLESRPKYQMRKMTAKEACGNKKVVYFPRV
VKVADVVSILRSNEHNGFPVIDHTRNGESLVIGLMLRSHLLVLLQSKVDFQHSPLPSDPR
GGGKPIRHNFTEFAKPVSSKGISIDDIHLSSDDLEMYIDLAPFLNPSPYVVPEDMSLSKV
YNLFRQLGLRHILVVPRASRVIGLITRKDLLIEDNENSETVELQSTSVRARRQDRKASVR
EADAEHPLLNGLLVKEYSSS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgaatcacttacagaacggaatcgagactgcgaggttagtgtggtctcggttg
cccaactccgatgatgaggcgctggacgaggtaggtctctccaagaagagtgatggaagc
cgttctgagagccttgattatgaagtcatcgagaataatgcttatcgggaagagcaggcg
cagagaagaaagttgatggttggatattatgtgggcgtgaagtggttctttgccctcctt
attggtatcggtactggattagctgctgttttcatcaatatttcggtcgagaactttgct
gggtggaagtttcaattaactttttccataatacaaaaatcatatgtggctggattctta
gtatacatattattcaacttgctcttggtcttttcctctgtgtatattgtcacgcaattc
gcaccagcagcagcaggatctggtattcctgaaattaagggttatttgaatggaattgat
actcatggtatccttcttttcagaaccttgattggaaagatattcggaagcattggttct
gtgggaggtggtctagccttgggaaaagaaggtcctcttgttcatactggtgcctgtatt
gcttctctgtttggtcaaggtggatccacaaaatatcatcttagttcaaggtggctacaa
gtttttaagagtgatcgggatcgacgcgatcttgtaacatgtgggtgtgcagctggagtg
gctgctgctttcagagctccagttggaggtgtattgtttgcattggaagaggtgacatca
tggtggaggagtcaactcatgtggcgtgtcttttttacttctgctgttgtggctgttgtg
gtgcgaactgcaatgggatggtgtaagagtggaaagtgtggacattttggctcaggtggc
ttcataatatgggacatatcagatggtcaagaggactactcgtttgaggaattattgccg
atggcaattattggtgttattggaggtcttcttggagccttgttcaaccagcttactatt
tatattacttactggcgccgaaattatttgcacaagaaagggagccgagtgaagatgatt
gaagtctgccttgtgtccctgataacttcagttatttcctttggattgccacttctaaga
aaatgcagtccatgccctgaagtagaacttaattctggcattgaatgcccccgtcctcca
gggatgtatgggaattatgtaaatttctattgtcataaggacaacgagtacaatgatctt
gcaacaattttcttcaatactcaggatgatgccatacggaatttatttagtgcaaaaaca
attcatgagtacagtgcacaaagcctattgacctttttggttatgttttattccttagca
gtgctgacgtttggtactgctgttccagctggtcaatttgttcctggaataatgatagga
tcaacctatgggcgtcttgttggcatgtttgttgttaacttctacaagaagcttaacatt
gaagagggaacatatgctctacttggagctgcttcttttcttggaggctcaatgcgaatg
acagtgtcactttgtgtcattatggttgaaatcacaaataatctgaaacttttacctctt
atcatgcttgttcttcttatatcaaaggctgttggtgatgcctttaatgaaggtttgtat
gaagaacaggcacggttgaggggcattcctttactcgaatcaagacctaagtaccaaatg
aggaaaatgactgcaaaagaggcctgtggcaataaaaaggttgtatatttccctcgtgtt
gttaaggttgcggatgtagtttctattttgcgaagcaatgagcataatggtttccctgta
atagatcacacaagaaatggggaaagccttgtaataggactcatgcttcgaagtcactta
ttggtgcttctgcagtccaaggtagattttcagcatagccctttgccctctgatccaaga
ggtggaggcaagccaatcaggcacaatttcactgaatttgcaaaacctgtttccagtaaa
ggaatctccatagatgatatacatctaagttcagatgacctggaaatgtatatagatctt
gctccatttttgaacccatccccttacgttgtccctgaagatatgtctttgtcaaaggta
tacaatcttttccgccaactaggattgaggcatatacttgttgtcccccgtgcctctcgt
gttattggtttgattaccagaaaggatttgttaattgaggataatgagaattcagagaca
gtggagcttcaatcgactagtgtaagagctcgacggcaagataggaaagcatctgtgagg
gaagcagatgcagaacacccacttctgaatggtcttctggtgaaagagtattcatcaagc
tga
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