Vitis riparia (riverbank grape): 117914561
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Entry
117914561 CDS
T07274
Name
(RefSeq) YTH domain-containing protein ECT4-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117914561
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117914561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
117914561
NCBI-ProteinID:
XP_034685813
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Position
5:complement(1872554..1877737)
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AA seq
714 aa
AA seq
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MEMYVSENGNAETYLIQGTESNPLLTTQLVEQIQAMYNEGTPEFVVDQNLYYPTATNYGY
YCTGFESPGEWDDHHRIFGLDGPDIQYSGAQTDSLPYVYYTPSYGYAQSPYNPYNPYIPG
AMIGVDAPFVGTQQYYTMPPYQNPVSSPAYIPIVVQSRPDIIPNSSPDPLLDTGLAAANR
PDGRGRKHNLSSASAAFTMPSQRPASNQTHSFTRVSDVPRAIAGSSKQPVTHGSVTSGSF
PGPASSHALQGRSTPDSIQAMDNVPHGRVLPHHNQLKLAIPSGNGMSDFGSNAQLRAPMD
KFRPKFNYGRAQNDANGSQDGLSEQNRGPRINRSENQLAVKAYTTKAGDTNAQGNIIIYT
DQYNKDDFPVDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLENAYEDAQRIALG
KRRGCPVFLFFSVNASGQFCGVAEMIGPVDFHKDMDFWQQDKWSGSFPVKWHIIKDVPNT
NFRHIILENNENKPVTNSRDTQEIRFKQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQ
DEKTRLLIKSYESPFFVPPLDPPRKLNFVIDLPPSEEKMTKQTDVRSLEKPVAASTATDQ
VSLKSDDINRSSMNEKCSTAETKDDTISTLKIGSLTINPKQVESIPTMAAAPPTPAGTVV
GTESVDVVTVGSMPVKVNGFAESPGLFTFGTIPLDPRTLQLEKGVLFGKNGPPR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgtatgtttctgaaaatggaaatgcagaaacttatctgattcaaggtacagag
tcaaacccacttttaacaacgcaacttgttgaacaaattcaagctatgtataacgaggga
accccagagtttgttgttgatcagaacttgtattatcctactgccaccaactatgggtat
tactgtacaggatttgaatcacccggtgaatgggatgaccaccataggatttttggtctg
gatggtccagatatccagtactcgggtgcgcaaactgatagtttgccttatgtatattat
acacctagctatggatatgcacagtctccatacaacccatacaatccttacatacctggt
gccatgataggagttgatgccccatttgttgggacgcaacaatattacacaatgcctcct
tatcaaaaccccgtctcttcacctgcttatatccccattgttgttcaatctagaccagat
atcattccaaatagttcacctgatcccttgttagatactggtttagctgctgctaatagg
cctgatggacgaggtcgaaaacataatctttcttcagcatctgcagcctttaccatgcct
tctcaaagacctgcttcaaatcaaacacattcctttaccagggtatcagatgtgccaaga
gctattgccggatcaagtaagcagcctgtgacacatggaagtgttacttccggtagtttt
ccgggtccagcgtcatcgcatgccctccagggtagaagtacgcctgactcaattcaggct
atggataatgttccacatggaagggttctgcctcatcacaaccaattaaaacttgctatc
ccttctggtaatggcatgtctgattttggatctaatgctcaactccgagcccccatggat
aagtttcgtccaaagtttaattatggcagagctcagaatgatgcaaatggaagccaagat
gggctgagtgaacagaatcgtggccctagaatcaacagatcggaaaatcagttggctgtt
aaagcttacacaactaaggcaggagatactaatgcacaaggaaacatcattatctatact
gatcagtacaacaaggatgacttcccagttgactatgtggatgcaaagttctttgtgatc
aaatcatacagtgaggatgatgtacacaaaagcattaaatataacgtgtggtcatctaca
cccaatgggaacaagaagctggaaaatgcttatgaagatgcacagaggatagctctgggg
aaacggaggggctgtcctgtttttctgttcttctcagtcaatgcaagcggccaattctgt
ggtgttgcagagatgattggccctgttgatttccataaggatatggacttctggcagcaa
gataagtggagtggaagcttccctgtcaagtggcacattataaaggatgtaccgaatacc
aactttaggcacatcatactagagaacaatgagaataagccagtgactaatagtagagac
actcaagagataagatttaagcaaggcctggaaatgttgaaaatattcaaaaatcacaca
acgaagacatctttacttgatgactttatgtattatgaaaaccgacagagaatcatgcaa
gatgagaaaaccaggctgcttattaaaagctatgaaagcccattctttgtacctccatta
gaccccccgcggaagctaaattttgtgattgacctgcccccaagtgaagagaagatgacc
aagcagactgatgtgagaagtttagagaagcctgtggctgcttccactgccactgatcag
gtatccctaaagtctgatgacataaatcggagtagtatgaatgaaaagtgcagtacagct
gaaacaaaggatgataccatatctaccttaaaaattggttcgctcaccatcaacccaaag
caagtggaatcaataccaacaatggctgctgctcctcccactcctgctggtacagtagtg
ggcactgaatcagttgatgttgtcacagtgggttcaatgccagtcaaagttaatggtttt
gctgagtctcctggtttgttcacctttgggacaattccacttgatcctagaacattgcag
cttgaaaagggagtcctctttggtaaaaatgggcccccacgttaa
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