Vitis riparia (riverbank grape): 117914575
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Entry
117914575 CDS
T07274
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00061
Fatty acid biosynthesis
vri00071
Fatty acid degradation
vri01100
Metabolic pathways
vri01212
Fatty acid metabolism
vri04146
Peroxisome
Module
vri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117914575
00071 Fatty acid degradation
117914575
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117914575
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vri01004
]
117914575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117914575
Enzymes [BR:
vri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117914575
Lipid biosynthesis proteins [BR:
vri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117914575
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of breast milk
117914575
Exosomal proteins of breast cancer cells
117914575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117914575
NCBI-ProteinID:
XP_034685844
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Position
5:4419879..4444908
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AA seq
697 aa
AA seq
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MESAPQRRLTAIQTHLIATAGDDRSHSQLLTNQTAGEFVSEQGYSVVLPEKLETGKWNVY
RSAQSPLRLVSRFPDHPEIGTLHDNFVHSVETFRDYKYLGTRIRVDGTVGEYKWMTYGEA
GTARSAIGSGLIYYGIPKGSCVGLYFINRPEWLIVDHACSAFSYVSVPLYDTLGPDAVKY
IVNHAVLQAIFCVPQTLNSLLSFLSEIPSVRLIVVVGGIDDQMPSLPSTTGVEVVSYSKL
LNQGRSHPQPFCPPKPDDVATICYTSGTTGTPKGAVLSHGNLIANVAGATLSVKFYPSDV
YISYLPLAHIYERANQVMTVYFGVAVGFYQGDNLKLMDDMAALRPTIFCSVPRLYNRIYA
GITNAVKTSGVLRERLFNAAYNAKKRAILSGKNPSPMWDRLVFNKIKEKLGGRVRFMVSG
ASPLSPDVMEFLRICFGGRITEGYGMTETSCVISSMDESDNLTGHVGSPNPACEVKLVDV
PEMNYTSEDQPYPRGEICVRGPILFLGYHKDEVQTREVIDEDGWLHTGDIGLWLPGGRLK
IIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSMNSSLVAIVSVDPDVLKAW
AASEGIQYQDLGQLCNDPRVRAAVLADMDVVGREAKLRGFEFAKAVTLVLEPFTMDNDLL
TPTFKIKRPQAKAYFANAISSMYAELSTSDPSPQSKL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgcaccacaacgtcgcctgacggctatacagacacacctcatcgccaccgcc
ggcgacgaccgctcgcattcacagctccttaccaatcaaaccgccggcgagttcgtttcc
gagcagggctatagtgtggtgcttccagagaaattggagacaggaaagtggaatgtctac
agatctgcacagtctcctttgaggcttgtgagtagattccccgatcatcctgaaattggt
acattgcacgataattttgtgcactcagttgagaccttccgtgattacaagtatttgggt
acacgaattcgagttgatggaacagttggagagtacaaatggatgacatatggagaagca
ggtactgctcgatcagcaattggttctggtttaatatactatggaataccgaaaggatct
tgtgttggcctatattttatcaacagacctgagtggctcattgttgatcatgcctgctct
gcattttcatatgtatcagttcctttatatgacactcttggtccagatgctgtcaagtat
attgtaaatcacgctgtcttacaagctatattttgtgtgccacaaacgttaaactctttg
ctgagcttcttgtctgagatcccatccgtacgtttaatagtggtagttggaggaatagat
gatcaaatgccatcacttccatcaacaactggagttgaggttgtatcatattcaaaacta
ctcaatcagggtcgcagtcatccccaacctttttgccccccaaagcctgatgatgttgca
accatttgctatacaagtggtacaactgggacacctaagggagctgtactgtcccatgga
aacttgattgctaatgttgctggggccactctttccgtcaaattttacccctcagatgtt
tacatatcatatcttcctttggcacacatctatgaacgggccaaccaggtcatgacagta
tattttggagttgcagttggattctaccagggagacaatttgaaactaatggatgatatg
gctgctttaagaccaactatattctgcagtgttcctcgactgtacaatagaatctatgct
ggcattacaaatgctgtaaagacatctggtgttttaagggagaggctgttcaatgctgca
tacaatgctaagaagagagcaatattgagtggtaagaatccatctcccatgtgggacaga
ttggtatttaataaaataaaagaaaagcttggaggccgagttcgatttatggtttcgggt
gcctcacccttgtctcctgatgtcatggaatttttgaggatctgctttgggggtcgaata
accgaaggatatggaatgactgaaacttcttgtgtaataagctcaatggatgagagtgac
aacctaaccggtcatgttggatcacctaatccagcttgtgaagtgaagcttgtggatgtt
ccggaaatgaactacacatctgaggatcagccctatcctcgtggtgaaatctgtgttcgg
ggtcccatactttttctaggttaccataaagatgaagtgcagacgagagaggtaattgat
gaagatggatggcttcatacgggagacataggtttatggttacctggaggtcgcctaaag
atcattgataggaagaagaacatttttaagttggcacaaggagagtacatagctccagag
aaaattgagaatgtatatgctaaatgcaaatttgttgcccagtgctttgtatatggtgac
agcatgaactcatctttggttgctatagtgtcagtggatccagatgttttaaaagcatgg
gccgcatctgaaggcatccagtatcaagatttaggacaactgtgtaatgacccaagagtg
agggctgctgtcctggctgacatggatgttgttggtagggaagctaagttgagaggtttt
gaatttgccaaagctgtgactttggtgcttgaaccatttaccatggacaatgatctgctt
actccaacattcaagatcaagagacctcaagcaaaggcatactttgcgaatgcaatatct
agcatgtatgctgaactctctacatccgatccctcccctcagagcaagttgtga
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