Vitis riparia (riverbank grape): 117914583
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Entry
117914583 CDS
T07274
Name
(RefSeq) nuclear poly(A) polymerase 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117914583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117914583
Enzymes [BR:
vri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117914583
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
117914583
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
MTPAP-like_central
PAP_RNA-bind
Motif
Other DBs
NCBI-GeneID:
117914583
NCBI-ProteinID:
XP_034685856
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Position
5:complement(1425153..1436083)
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AA seq
563 aa
AA seq
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MAHAHRSQNSVALVHPQPLIHPQPPVVNAPVGFVPRPVGVINPSFGPVPPFDPASLPQPG
FVLNPAVLVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIVLTWVKRVAWQR
QRPKQQIAVTSATILTYGSYGLGVHGPESDIDALCVGPFFASMADDFFIVLRNMLESRPE
VSEIHCVKDAKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDETSWKSLS
GVRANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAFVCQKNPH
ANLNVLMSSFFKTFSGWPWPTPVALEDGRLPTGGTRETRALMPIQLPCSPYGYCHSNITK
STFYRITTELTLGHALTRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWV
GWVKSRFRFLLAKVEEVQGLCDPNPTEFIDPDAGEPNVVFFWGVQPGRINFSDIDVVEDD
FMQNINNGGYQGPPGKMNLSVIPTSQLPGYAQLDTGSRNRTKACWRMFNYHQPRVPVFSQ
HLPLYFVGYAATDKDAKRLDAWS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgctcaccggagtcagaacagtgttgctctggttcatccacagccgttgata
catcctcaacctccagtcgtgaacgctccggtcggctttgttccgagaccggtcggcgtg
ataaaccctagcttcggtcctgtgccgccttttgatcccgcgagtttaccgcaacctgga
tttgttttgaatccggcggtgttggtccgaatggaacatcgcaggtcaatctcgctgctt
cagtttatgtcaaacgaagggctcattccgtccccagaggaggagttgaagaggaaaaat
gtaattgagaagctcaaagagatagtgttgacatgggttaagagggttgcttggcaacgt
caacgcccaaaacaacaaattgcagttacttctgcaacgattttaacatatggctcgtat
ggccttggagttcatgggccagaatcagacattgatgctctatgtgttggccctttcttt
gcttccatggctgatgatttttttattgttctgcgcaacatgcttgaaagtagaccagaa
gtctcagagatccattgtgtcaaagatgccaaagttcctctaatgcggttcaaatttgat
ggaatatccgttgatcttccatatgctcagcttaaactattatatgttcctgaaaatttg
aatgtactcaacccatattttctaaggaatattgacgaaacaagttggaaaagcttgtcc
ggagtacgagctaatgaatgcattcttcagcttgttccaaatgtggagaattttcaatca
atacttcgatgtattaaattatgggcgaaaaggcgaggggtgtatggtaacttatttggg
tattttggtggagtccatttggccattcttgctgcttttgtttgtcaaaagaatccacat
gccaacttaaatgttctaatgtcaagcttttttaagactttctccggctggccttggcct
acaccagtagcattggaagatggaagactaccaactggaggcaccagagaaacacgtgca
ttaatgcccattcaattaccatgtagcccttatggatattgccattcaaacatcacaaaa
agtacattttacaggatcacgacagagcttactctagggcatgctctgactcgggatctc
ctaaggctagactttgactggaatgacatatttgagcctttttgttactccaagaaatat
tcgcgatttataaaaatttacctgtcgtcttctaatcaagatgaattaggggattgggtg
ggttgggtaaagtcacgctttcgcttccttcttgcaaaggtggaggaggtacagggtctg
tgtgaccccaacccaacagagttcatcgatcctgatgcaggagagccaaatgttgtgttt
ttctggggcgtacaacctggtaggataaatttttcggacatagatgttgtggaggatgac
ttcatgcaaaacattaataacggtggctatcaaggccctcctggaaagatgaatttgtct
gtcattcctacttctcagctgcctggttatgctcagctggatactggaagtaggaacagg
acaaaagcatgctggaggatgtttaattatcatcaaccaagggtcccggtgttctcgcag
catctgcctctgtactttgtagggtatgcagcaaccgataaggatgccaagcgcctggat
gcttggagctag
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