Vitis riparia (riverbank grape): 117914978
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Entry
117914978 CDS
T07274
Name
(RefSeq) F-box/LRR-repeat protein 4 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
vri
Vitis riparia (riverbank grape)
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vri04121
]
117914978
Ubiquitin system [BR:
vri04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117914978
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_At1g61320_AtMIF1
F-box_5
F-box
Motif
Other DBs
NCBI-GeneID:
117914978
NCBI-ProteinID:
XP_034686405
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Position
5:complement(3746365..3757722)
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AA seq
612 aa
AA seq
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MKGHDLINSYLPDELIIEIFRHMHSKSSRDACALVCKRWLALERNSRRTLRIGASGSPDS
FVKLLARRFVNVKNLYVDERLSVSHPVQLGRRRGGSQSTLSSLKLPYMIERGESDDSELE
SNCFSDAGLIALGEAFTKLKKLSLIWCSNVTSMGLQSFAGKCRSLRSLDLQGCYVGDQGL
AAVGECCKELQDLNLRFCEGLTDKGLVELAIGCGKSLKVLGIAACAKITDISLEAVGSHC
RSLETLSLDSEFIHNEGVLAVAEGCRLLKVLKLLCINVTDEALEAVGTCCLSLEVLALYS
FQKFTDRSLSAIGKGCKKLKNLILSDCYFLSDKGLEAIATGCSELIHLEVNGCHNIGTLG
LASVGKSCLRLTELALLYCQRIGDNALLEIGRGCKFLQALHLVDCSSIGDDAICGIANGC
RNLKKLHIRRCYEIGNKGIVAVGENCKSLKDLSLRFCDRVGDDALIAIGQGCSLNHLNVS
GCHQIGDAGIIAIARGCPELSYLDVSVLQQNLGDMAMAEIGEGCPSLKDIVLSHCRQITD
VGLAHLVKKCTMLETCHMVYCPGITTAGVATVVSTCANIKKVLVEKSKVSERTRRRAGSV
ISYICVDLSIPH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggccacgatctaatcaactcctatcttcccgatgagctcatcatcgagattttc
cggcacatgcactccaagtctagccgcgacgcctgcgctctcgtctgcaagcgctggctc
gccctcgagcgtaacagtcgccgcacgctccgcatcggcgcgtccggcagccctgattcg
ttcgtcaagctgctggcgaggcggtttgtcaatgtcaagaatctttacgttgacgagagg
ctctcagtctcgcatccggttcagttgggaagaagacggggtggcagccaatcaacactc
tcttctcttaagctgccctatatgattgagagaggtgaatctgatgacagtgagttggaa
tcaaactgtttttcagatgctggattgattgctcttggtgaagcctttaccaaacttaag
aagctgagtttaatatggtgctctaatgtaactagtatgggcttgcaatcctttgccggg
aagtgtagatccttgagatctttagatttgcagggttgctatgttggagatcaaggtcta
gctgctgttggggagtgttgcaaggaacttcaagatttgaatttgcgtttttgtgaaggc
ttgacggacaagggtttggttgaattagcaattggttgtgggaaatcactgaaagttctt
ggtattgcagcttgtgcaaaaataactgatatctcattggaagcagtggggtctcactgc
agatctcttgagacgttgtcattggattcagaattcatacacaatgaaggggtgcttgct
gtggcggaaggttgccgtcttttgaaagttctgaaactactatgcattaatgtgacagac
gaagctttggaagctgttggcacctgttgtttatcactggaagtgttggctctgtacagc
ttccagaaattcaccgacaggagtctatcagctattggaaaagggtgtaagaagttaaag
aatcttattctaagtgactgttatttcttgagtgacaagggtttggaggcaattgcaact
ggttgttctgaacttatacatcttgaagttaatggatgtcacaatattggaacacttgga
ctagcgtctgttggaaaatcttgcttgcgcctgactgagttagctctgctgtattgccaa
agaatcggtgataatgcacttcttgaaataggcaggggctgcaaattcttgcaagctctt
cacttggtggattgttcgagtattggagacgatgccatatgtggtatagctaatggctgc
agaaacttgaaaaaacttcacattcgccgctgttatgagattgggaataagggaattgta
gctgttggtgagaattgtaaatcgctcaaagatcttagccttcgattttgtgatagggtt
ggagatgatgcccttattgctatcggtcagggttgctccctaaatcatctaaatgtcagt
ggttgtcaccaaattggtgatgctggaataatagccattgcaagaggctgcccagaactc
agttacctagatgtaagcgttcttcagcagaatttgggagacatggcaatggccgagata
ggagaaggttgcccatcactgaaggacatagtgctatcacactgtcgtcaaataaccgac
gtgggactagcccatcttgtaaaaaaatgcaccatgcttgagacctgccacatggtttat
tgcccaggcataaccacggctggagttgccaccgtcgtctcaacctgcgcgaacataaag
aaggtcctggtcgagaagtcgaaagtgagcgagagaactagaagaagggcaggctcagtc
atctcctacatatgtgtggacctttcaatcccgcactga
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